Gene Cthe_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1798 
Symbol 
ID4809782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2123408 
End bp2124061 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content38% 
IMG OID640107212 
Productredox-sensing transcriptional repressor Rex 
Protein accessionYP_001038212 
Protein GI125974302 
COG category[R] General function prediction only 
COG ID[COG2344] AT-rich DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTGG ATAAAAAAAT TTCCATGGCA GTAATCAGAC GTTTACCCAG GTACTACAGA 
TACCTTTCTG ATCTTTTGAA GCTTGGGATA ACAAGGATAT CTTCAAAGGA ATTAAGTTCC
AGGATGGGAA TAACTGCATC TCAGATACGT CAGGATTTGA ACTGTTTTGG AGGATTTGGA
CAACAGGGGT ACGGATACAA TGTCGAGTAT CTGTATAAGG AAATAGGCAA TATTCTTGGT
GTAAATGAAG CGTTTAAAAT TATTATCATC GGAGCCGGAA ATATGGGCCA GGCTCTAGCA
AATTACACCA ATTTCGAAAA AAGAGGCTTT AAGCTTATAG GTATTTTTGA TATAAATCCA
AATTTGATAG GTAAGAAAAT AAGAGATGTG GAGATTATGC ATCTTGACAG TTTGGACCGG
TTCGTGGCGG AAAATCAGGT TGATATTGCA ATTCTTTGTG TTCCGTACGA AAACACTCCA
GCAGTGGCCG ACAAAGTGGC ACGGCTTGGT GTCAAAGGAT TGTGGAATTT CTCTCCTATG
GATTTGAAGC TCCCTTACGA TGTTATAATC GAAAATGTTC ACTTAAGCGA CAGTCTTATG
GTTTTGGGAT ACAGATTGAA TGAAATGCGC AAAAGTCAAA GAAATAAGTC GTAA
 
Protein sequence
MNLDKKISMA VIRRLPRYYR YLSDLLKLGI TRISSKELSS RMGITASQIR QDLNCFGGFG 
QQGYGYNVEY LYKEIGNILG VNEAFKIIII GAGNMGQALA NYTNFEKRGF KLIGIFDINP
NLIGKKIRDV EIMHLDSLDR FVAENQVDIA ILCVPYENTP AVADKVARLG VKGLWNFSPM
DLKLPYDVII ENVHLSDSLM VLGYRLNEMR KSQRNKS