Gene Cthe_1794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1794 
Symbol 
ID4810039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2117170 
End bp2119257 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content44% 
IMG OID640107208 
Productelongation factor G 
Protein accessionYP_001038208 
Protein GI125974298 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACC TGGCTGCGGA TAGGATTCGC AACGTCTGCC TGATGGCTCA CGGAGGAGCG 
GGAAAAACAA CTTTGGCGGA AGCGATGCTT TATAACACCG GAGTACTTGA GAGGTTCGGA
AGAGTCGAAG ACGGTACCAC CACTTCAGAT TACGATCCTG AGGAAATCAA AAGAAAGAGC
TCAATCAGCA CGTCTATTTG CCCATGTCAA TGGAAAGACC ACAAAATTAA CGTAATTGAT
ACTCCCGGAT ATTTTGATTT TGTCGGAGAA GTAAAGCAGG GAATAAGAGT TGCGGATGGT
GCCGTAATTT TGGTTTCGGC AAAAAGCGGA GTTGCGGTTG GAACGGAAAA AGCGTGGGCT
AGAGCCCGGG AAAGAAAAAT TCCTGTAATC TTTTTCGTGA ATAAAATGGA TGATGAAAAT
GCAAACTTCT TCAGAACTTT GGAACAATTG GCTGCGGCCT TCGGGAAAAA CGTGATTGCC
TTTCAAATCC CCATCGTTGA AAATTCCAAG TTTACCGGAT ATGTGGATAT CGTAACGATG
AAAGCCAAAA AGTTTGATAA AGATAAACTG GTTGATACAG ATATTCCTTC CGAATTGAAC
AATCAGGCAC AAGAGATCAG AAATGCTTTG ATTGAAGCAG TGGCGGAAAC CAGTGAAGAA
CTTATGGAAA AATTCTTTGA CGGCCAGGAA TTTACCGATG AGGAAATAAG CAAAGGAATT
CGGCAGGGAA TAAAGGATGG CTCTTTGGTT CCGGTTTTCT GTGGTTCGGC GGCTTTAAAT
TTCGGAGTAA AAACACTGAT GGATTCTATC ATTGAATTTA TGCCTTCACC GATTGATTCC
GGTGTGATAA AAGCGAAAAA ATCAGGCAAA GACGAAATTT GCGAACTTAA AACCAGCGAG
GATGCACCCC TTTCCGCTTT AGTCTTCAAA ACAATTGCCG ATCCTTTCGT AGGAAAGATT
TCGATGATAA GAGTATTCTC AGGAACATTA AAGTCGGAGT CCACGGTTTA CAACACCACA
ACGGGTAAAA CGGAAAAAAT ATCGCAGCTA TTTGTATTAA GAGGGAAAAA GAATATTCCG
GTGGATAAGC TGGTGACAGG AGACATAGGA GCGGTAACCA AGCTTCAGTC GGTAAACACG
AATGACACCC TGTGCACTCA GGAAAATCCC GTGGTATTGG ACAAGATAGA GTTTCCGGAA
CCTGTCATTT CCATGGCTGT TCAGCCAACG GCAAAAGGTG ATGAGGAAAA AATAAGTGCA
GGTCTGAACA AGCTTCAGGA TGAAGACCCC ACTTTCAAAG TTACCACAAA CAACGAAACC
CATCAAACCA TCATTTCCGG TATGGGCGAA ATTCATTTGG ATGTAATAGT GAGCAAACTC
AAAACAAAAT TTGGCGTGTC GGTTGAACTG GCTCCCCCAA AAATACCATA TCGTGAAACA
ATTAAGAAAA AAGTCAAAGT GGAAGGAAAG CACAAGAAAC AGTCCGGCGG TCACGGGCAA
TATGGTCATG TTTGGATAGA ATTTGAACCC GGCGACAAGG AAGAACTGAC CTTCGATGAA
AAAATATTCG GAGGTGCGGT ACCGAAGCAG TATATCCCGG CGGTTGAGAA AGGGTTGCAG
GAAAGTATCC GAAAAGGCGT GCTGGCGGGT TATCCGGTAG TATTCCTTAA GGCAACGCTG
GTGGACGGAT CATATCACTC TGTGGATTCA TCGGAAATGG CCTTTAAAAT AGCCGCAAAT
ATTGCTTACA AGAAAGGTAT GGAGCAGGCG TCTCCGGTTC TTTTGGAGCC TATTTACCAT
GTGGAGGTTT ATGTTCCTGA AAGCTATATG GGAGAAATAA TCGGTGACCT GAACAAGAGA
AGAGGAAGAA TACTTGGAAT GAATCCCCAG GAAAACGGCA TTCAGCAGGT TGTTGCAGAA
GTGCCCGAAG CCGAAATGTT TAAATATGCC ACGGACCTGA CATCGATGAC CCAGGGAAGA
GGTTCATTTA AGATGTGGTT TGAAAGATAT GAAGAAGCAC CGCCTCATGT AAGTCAGAAG
GTGATTGAGG AAGCAAGAAA GAATATGGCT GCGGAAGAGG CGCAATAA
 
Protein sequence
MKDLAADRIR NVCLMAHGGA GKTTLAEAML YNTGVLERFG RVEDGTTTSD YDPEEIKRKS 
SISTSICPCQ WKDHKINVID TPGYFDFVGE VKQGIRVADG AVILVSAKSG VAVGTEKAWA
RARERKIPVI FFVNKMDDEN ANFFRTLEQL AAAFGKNVIA FQIPIVENSK FTGYVDIVTM
KAKKFDKDKL VDTDIPSELN NQAQEIRNAL IEAVAETSEE LMEKFFDGQE FTDEEISKGI
RQGIKDGSLV PVFCGSAALN FGVKTLMDSI IEFMPSPIDS GVIKAKKSGK DEICELKTSE
DAPLSALVFK TIADPFVGKI SMIRVFSGTL KSESTVYNTT TGKTEKISQL FVLRGKKNIP
VDKLVTGDIG AVTKLQSVNT NDTLCTQENP VVLDKIEFPE PVISMAVQPT AKGDEEKISA
GLNKLQDEDP TFKVTTNNET HQTIISGMGE IHLDVIVSKL KTKFGVSVEL APPKIPYRET
IKKKVKVEGK HKKQSGGHGQ YGHVWIEFEP GDKEELTFDE KIFGGAVPKQ YIPAVEKGLQ
ESIRKGVLAG YPVVFLKATL VDGSYHSVDS SEMAFKIAAN IAYKKGMEQA SPVLLEPIYH
VEVYVPESYM GEIIGDLNKR RGRILGMNPQ ENGIQQVVAE VPEAEMFKYA TDLTSMTQGR
GSFKMWFERY EEAPPHVSQK VIEEARKNMA AEEAQ