Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1792 |
Symbol | |
ID | 4810037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2115482 |
End bp | 2115943 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640107206 |
Product | Firmicute transcriptional repressor of class III stress genes |
Protein accession | YP_001038206 |
Protein GI | 125974296 |
COG category | [K] Transcription |
COG ID | [COG4463] Transcriptional repressor of class III stress genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGAC TCAGTGATCT TATAGAGGCA TTTATCAAAC AGCTCATAGA TGACACTGAC GGAACCATTG AAATACAGAG AAACGAGCTT GCCAGCCAAT TCAACTGTGT CCCGTCACAG ATAAACTATG TAATAGACAC AAGATTTACG ACAGAGAGGG GCTATTATGT TGAAAGCCGC AGGGGTGGAG GAGGATATAT AAAGATAACG CGGGTAAGTA TAGGACATGA AGGCAAGAAT TATCTTATGC ACATCATAAA CTCCATGGGA GACAGCATTT CACAGCAGTC GGCCCATGTA TTTATAAACA ACTTTGTGGA CCACAATGTA GTGACGGAAA AAGAAGCCAT GCTTCTTAAA GCAGCTACCA GCGACAAGGC TCTTGCAGCC GTTCCTGTGG AAAGCAGAGG GCAAATCAGA GCCAGTATTC TGAAAAACAT GCTGGTGTGT CTTTTGGTTT AA
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Protein sequence | MARLSDLIEA FIKQLIDDTD GTIEIQRNEL ASQFNCVPSQ INYVIDTRFT TERGYYVESR RGGGGYIKIT RVSIGHEGKN YLMHIINSMG DSISQQSAHV FINNFVDHNV VTEKEAMLLK AATSDKALAA VPVESRGQIR ASILKNMLVC LLV
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