Gene Cthe_1792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1792 
Symbol 
ID4810037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2115482 
End bp2115943 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content44% 
IMG OID640107206 
ProductFirmicute transcriptional repressor of class III stress genes 
Protein accessionYP_001038206 
Protein GI125974296 
COG category[K] Transcription 
COG ID[COG4463] Transcriptional repressor of class III stress genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGAC TCAGTGATCT TATAGAGGCA TTTATCAAAC AGCTCATAGA TGACACTGAC 
GGAACCATTG AAATACAGAG AAACGAGCTT GCCAGCCAAT TCAACTGTGT CCCGTCACAG
ATAAACTATG TAATAGACAC AAGATTTACG ACAGAGAGGG GCTATTATGT TGAAAGCCGC
AGGGGTGGAG GAGGATATAT AAAGATAACG CGGGTAAGTA TAGGACATGA AGGCAAGAAT
TATCTTATGC ACATCATAAA CTCCATGGGA GACAGCATTT CACAGCAGTC GGCCCATGTA
TTTATAAACA ACTTTGTGGA CCACAATGTA GTGACGGAAA AAGAAGCCAT GCTTCTTAAA
GCAGCTACCA GCGACAAGGC TCTTGCAGCC GTTCCTGTGG AAAGCAGAGG GCAAATCAGA
GCCAGTATTC TGAAAAACAT GCTGGTGTGT CTTTTGGTTT AA
 
Protein sequence
MARLSDLIEA FIKQLIDDTD GTIEIQRNEL ASQFNCVPSQ INYVIDTRFT TERGYYVESR 
RGGGGYIKIT RVSIGHEGKN YLMHIINSMG DSISQQSAHV FINNFVDHNV VTEKEAMLLK
AATSDKALAA VPVESRGQIR ASILKNMLVC LLV