Gene Cthe_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1758 
Symbol 
ID4810188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2078367 
End bp2078804 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content39% 
IMG OID640107171 
Producthypothetical protein 
Protein accessionYP_001038172 
Protein GI125974262 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1664] Integral membrane protein CcmA involved in cell shape determination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0573572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATA AAAAAGAGAA TTCAAGCCCG GATGTTTTTG ACACGCTTAT AGGAGTAAAT 
ACCTTTTTGG AAGGCAATAT CGAGACGGAA GGAACCGTCA GAATCGACGG AAAGATTAAG
GGGAACGTTA AAGTAAAAGG TGATGTCTAC ATAGGCAAAG ATGCCAATAT TAACGGAAAT
ATATCTGCCA ACAATGTTTA CATGTCAGGC AGAGTTGACG GAAATATTGA AGCCAAGGGA
GTACTGAGGA TACTGTCAAC TGCCCAGCTT TACGGAGATA TACTGGTTCA AAGCCTCATA
TCCGATGAAG GCAGTATATT TGAAGGAAAC TGCAAAATGG TGTCCGCTTC AAATGCGCAA
AATTCAGACG GCAGTGTTTC AAAAAACAAT AAAAACGTTA AAGACAAAGA TGGTGACAAA
TCCCATACTT CTGCATAA
 
Protein sequence
MFNKKENSSP DVFDTLIGVN TFLEGNIETE GTVRIDGKIK GNVKVKGDVY IGKDANINGN 
ISANNVYMSG RVDGNIEAKG VLRILSTAQL YGDILVQSLI SDEGSIFEGN CKMVSASNAQ
NSDGSVSKNN KNVKDKDGDK SHTSA