Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1758 |
Symbol | |
ID | 4810188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 2078367 |
End bp | 2078804 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640107171 |
Product | hypothetical protein |
Protein accession | YP_001038172 |
Protein GI | 125974262 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0573572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAATA AAAAAGAGAA TTCAAGCCCG GATGTTTTTG ACACGCTTAT AGGAGTAAAT ACCTTTTTGG AAGGCAATAT CGAGACGGAA GGAACCGTCA GAATCGACGG AAAGATTAAG GGGAACGTTA AAGTAAAAGG TGATGTCTAC ATAGGCAAAG ATGCCAATAT TAACGGAAAT ATATCTGCCA ACAATGTTTA CATGTCAGGC AGAGTTGACG GAAATATTGA AGCCAAGGGA GTACTGAGGA TACTGTCAAC TGCCCAGCTT TACGGAGATA TACTGGTTCA AAGCCTCATA TCCGATGAAG GCAGTATATT TGAAGGAAAC TGCAAAATGG TGTCCGCTTC AAATGCGCAA AATTCAGACG GCAGTGTTTC AAAAAACAAT AAAAACGTTA AAGACAAAGA TGGTGACAAA TCCCATACTT CTGCATAA
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Protein sequence | MFNKKENSSP DVFDTLIGVN TFLEGNIETE GTVRIDGKIK GNVKVKGDVY IGKDANINGN ISANNVYMSG RVDGNIEAKG VLRILSTAQL YGDILVQSLI SDEGSIFEGN CKMVSASNAQ NSDGSVSKNN KNVKDKDGDK SHTSA
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