| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1749 |
|---|
| Symbol | |
|---|
| ID | 4810179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2069230 |
|---|
| End bp | 2070282 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640107162 |
|---|
| Product | DNA-cytosine methyltransferase |
|---|
| Protein accession | YP_001038163 |
|---|
| Protein GI | 125974253 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0270] Site-specific DNA methylase |
|---|
| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000535565 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAGGAGA ACTGTTTTGT GGTCCTGGAG GGCTGGCTTA TGGAGCAAAA
ACAGCAGAAA TAGAAAATAA GGAATATAGA ATAATTCATA AATGGGCAAA TGACTATGAC
AGAGATACTT GTGATACTTA CATACACAAT ATATGTCCGG ATAATCCTGA ATCGGTTATA
TGTCAGGATG TAAGGAAGTT GAACATAGAT TCTTTGCAAC CCATAGATGC CCTTGCATTT
GGTTTTCCAT GCAATGACTT TTCGGTTGTA GGCGAACAAA AAGGATTTAA TGGAGAATAT
GGACCATTGT ACACTTATGG GGTAAAAGTA TTGAAAAAGT TCAAACCAAT GTGGTTTCTT
GCTGAAAATG TAGGCGGTTT AAAGTCGGCA AATGATGGTG GAGCGTTTAA AAAGATACTT
AATGATTTAG GAGAGGCTGG ATATAGATTA TATCCTCATT TATATAAGTT TGAAGAATAT
GGTATACCGC AGGCACGTCA TAGAATAATT ATTATAGGTA TTAGAAAAGA TTTACCGTAT
GAATTTAAAG TTCCTTCTCC GGTTCCGTAT AAAGACTTAG ATAATACCTG TAGAACAGCA
TTAGAAGTAC CACCAATTCC GAAAGATGCA CCGAATAATG AATTGACAAG ACAATCAGCA
ATAGTAACAG AGAGATTAAA ATATATAAGA CCTGGAGAAA ATGCTTTCAC GGCAGATTTA
CCTGAGCATC TTCGATTGAA TGTTAAAGGG GCAAAGATAA GTCAAATATA TAAAAGATTA
GATCCTAATA GACCAGCCTA TACAGTAACA GGTTCAGGCG GCGGTGGAAC TCATATATAT
CATTATGCTG AGCCAAGAGC ATTAACTAAT AGGGAAAGAG CAAGACTGCA GACATTTCCA
GATGATTATT TATTTAAGGG TTCAAAGGAA AGTGTAAGAA GGCAGATAGG GATGGCAGTC
CCAGCTAAAG GAGCAAAGAT AATATTTGAA GCTGTATTAA GAACATTTGC AGGTATTGAA
TATGAAAATG TTCCATGTAA TGTTAATGAA TAG
|
|---|
| Protein sequence | MKFELGELFC GPGGLAYGAK TAEIENKEYR IIHKWANDYD RDTCDTYIHN ICPDNPESVI
CQDVRKLNID SLQPIDALAF GFPCNDFSVV GEQKGFNGEY GPLYTYGVKV LKKFKPMWFL
AENVGGLKSA NDGGAFKKIL NDLGEAGYRL YPHLYKFEEY GIPQARHRII IIGIRKDLPY
EFKVPSPVPY KDLDNTCRTA LEVPPIPKDA PNNELTRQSA IVTERLKYIR PGENAFTADL
PEHLRLNVKG AKISQIYKRL DPNRPAYTVT GSGGGGTHIY HYAEPRALTN RERARLQTFP
DDYLFKGSKE SVRRQIGMAV PAKGAKIIFE AVLRTFAGIE YENVPCNVNE
|
|---|
| |