Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1740 |
Symbol | |
ID | 4810170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2061942 |
End bp | 2062706 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640107153 |
Product | BRO-like protein |
Protein accession | YP_001038154 |
Protein GI | 125974244 |
COG category | [K] Transcription |
COG ID | [COG3617] Prophage antirepressor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000880579 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGAAT TACAAGTTTT TAAAAACACA GAATTTGGTG AATTGAACAT TTTAGTAATT GACGGAAAAG AATATTTTCC AGCAACTGAT TGTGCAAGGA TACTTGGATA TTCAGATCCT TATGATGCAA TTAATAGGCA TACAAAGGGG TCGGTGAAAC ACCGAGTCCT TACAAGTGGT GGTGAACAGG AAATAAAGTT TATACCAGAA GGAGATCTTT ATAGATTAAT TGTTAAATCA AAATTACCTA AAGCAGAACG TTTTGAACGA TGGGTTTTTG ATGAAGTTTT ACCTTCTATA AGAAAACACG GAATTTATGC AACGGATAAG GTAATAGAAG AAATGCTAAA TAACCCAGAT ACAATGATAA AAACACTTCA GGCACTAAAA GAAGAAAGAA AAAAGATACA AAAGCTTACA GAAAAGATTG AAGAACAGGA TAAGAAACTA GAATTATTTA GAAATCTTCA GCGTTTAAAT GAAATGCTTA GAGCTTCAGA TATTGGTATG TATTATGGAA TAACGGCACA GGAGTTTAAC AGAATAATGC AGGATGCAGG TGTAATTAAA AAAGTTGATA ACAACTTCTA TGGTCGTAAT CCATACTACG TTATGACAGC TGAATACAGT CATACAAAAT ACTGTCAGGT TATTACTGAT ACCTTGAAAA ATGGAATGAA AATAAAGACA AATGTGTGGC TTCCTGAATC ATTAGAGTTT ATTGATCAAA TCATGAATCA GTATGGATAC AAATTTGAAA TTTAG
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Protein sequence | MNELQVFKNT EFGELNILVI DGKEYFPATD CARILGYSDP YDAINRHTKG SVKHRVLTSG GEQEIKFIPE GDLYRLIVKS KLPKAERFER WVFDEVLPSI RKHGIYATDK VIEEMLNNPD TMIKTLQALK EERKKIQKLT EKIEEQDKKL ELFRNLQRLN EMLRASDIGM YYGITAQEFN RIMQDAGVIK KVDNNFYGRN PYYVMTAEYS HTKYCQVITD TLKNGMKIKT NVWLPESLEF IDQIMNQYGY KFEI
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