Gene Cthe_1740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1740 
Symbol 
ID4810170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2061942 
End bp2062706 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content32% 
IMG OID640107153 
ProductBRO-like protein 
Protein accessionYP_001038154 
Protein GI125974244 
COG category[K] Transcription 
COG ID[COG3617] Prophage antirepressor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000880579 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAT TACAAGTTTT TAAAAACACA GAATTTGGTG AATTGAACAT TTTAGTAATT 
GACGGAAAAG AATATTTTCC AGCAACTGAT TGTGCAAGGA TACTTGGATA TTCAGATCCT
TATGATGCAA TTAATAGGCA TACAAAGGGG TCGGTGAAAC ACCGAGTCCT TACAAGTGGT
GGTGAACAGG AAATAAAGTT TATACCAGAA GGAGATCTTT ATAGATTAAT TGTTAAATCA
AAATTACCTA AAGCAGAACG TTTTGAACGA TGGGTTTTTG ATGAAGTTTT ACCTTCTATA
AGAAAACACG GAATTTATGC AACGGATAAG GTAATAGAAG AAATGCTAAA TAACCCAGAT
ACAATGATAA AAACACTTCA GGCACTAAAA GAAGAAAGAA AAAAGATACA AAAGCTTACA
GAAAAGATTG AAGAACAGGA TAAGAAACTA GAATTATTTA GAAATCTTCA GCGTTTAAAT
GAAATGCTTA GAGCTTCAGA TATTGGTATG TATTATGGAA TAACGGCACA GGAGTTTAAC
AGAATAATGC AGGATGCAGG TGTAATTAAA AAAGTTGATA ACAACTTCTA TGGTCGTAAT
CCATACTACG TTATGACAGC TGAATACAGT CATACAAAAT ACTGTCAGGT TATTACTGAT
ACCTTGAAAA ATGGAATGAA AATAAAGACA AATGTGTGGC TTCCTGAATC ATTAGAGTTT
ATTGATCAAA TCATGAATCA GTATGGATAC AAATTTGAAA TTTAG
 
Protein sequence
MNELQVFKNT EFGELNILVI DGKEYFPATD CARILGYSDP YDAINRHTKG SVKHRVLTSG 
GEQEIKFIPE GDLYRLIVKS KLPKAERFER WVFDEVLPSI RKHGIYATDK VIEEMLNNPD
TMIKTLQALK EERKKIQKLT EKIEEQDKKL ELFRNLQRLN EMLRASDIGM YYGITAQEFN
RIMQDAGVIK KVDNNFYGRN PYYVMTAEYS HTKYCQVITD TLKNGMKIKT NVWLPESLEF
IDQIMNQYGY KFEI