Gene Cthe_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1724 
Symbol 
ID4808899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2046326 
End bp2047078 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content33% 
IMG OID640107137 
Producthypothetical protein 
Protein accessionYP_001038138 
Protein GI125974228 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.01564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGAA AAGAAATAGT TAAAATTTTA AGTGAAGCCT TAGGTTCTCA AGCAAAGTAT 
CTTGGAGCAC CAAGCTTTGC CTATGAAATT AAAACGGAAA AGGAAATCTA CACAATAGAT 
AGGCAGGGAA CCATTATAAC TTCGCAAGGT AGGGTTGTTA CACTTAACGA AATTTTAAAG 
GGAGAGGATT CTGAAGAAAA AATAGAGGAT ACAACTATTG ATAGTTTTAA TTTAGAAATT 
CCATTAGGAG AGCATACGGG AAAAACGCTA ATAAATATTT TAAATATGCT TTACAGTAAA 
CAGCAGCTAA TTGTTAAAAC CTTCGAATTA AAAGAACCTT TTATTGAGGA AACCTTTATA 
AAGAATTTGA ATTTAAAGAG AACAGAAACT TTAGAAGAAT TTCAAAATGC TATTACTGAA 
GTTGGAACTG ATGGTTGCAA AGGCATATCC TTTGATTTTG AGAAAGGAAC TTTTACCTTT 
AAGCTATTAG GTGAAACCTT AAGCCATGAA AAAATATCCG CATTTATAGA ACTTGCATCT 
TTAATAAATG TGAACGCACA AAAATTAAAA CACACCTCTT TTAAGCAGGC TCAGGAGGAT 
AACCCTAAAT ATGCATTCAG AACTTGGCTC ATTCGCCTTG GCATGAATGG AAGTAGGTAT 
AAAGATATAA GGAAAACACT TCTTTCAAAT CTTGAAGGCA GTTGTGCTTT TAGAAAATTA 
CAACAGGAAG GAAGTGCTGA AATAAATGGA TAA
 
Protein sequence
MDRKEIVKIL SEALGSQAKY LGAPSFAYEI KTEKEIYTID RQGTIITSQG RVVTLNEILK 
GEDSEEKIED TTIDSFNLEI PLGEHTGKTL INILNMLYSK QQLIVKTFEL KEPFIEETFI 
KNLNLKRTET LEEFQNAITE VGTDGCKGIS FDFEKGTFTF KLLGETLSHE KISAFIELAS 
LINVNAQKLK HTSFKQAQED NPKYAFRTWL IRLGMNGSRY KDIRKTLLSN LEGSCAFRKL 
QQEGSAEING