| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1720 |
|---|
| Symbol | |
|---|
| ID | 4808895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 2041016 |
|---|
| End bp | 2041759 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640107133 |
|---|
| Product | peptidase S14, ClpP |
|---|
| Protein accession | YP_001038134 |
|---|
| Protein GI | 125974224 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTTT GGAATTTTAA AAACAGCGAA GAAAATGAGG AGGAGATAGA GCTTAGAATT
GATGGTGACA TTGTCATGGA CGATGATTTT TGGTCGATGC TATTTGGAAA TGACAATGTA
ACTCCAAAGG GTTTTATGTC AGAACTAAAT AAATATAAAG GCAAAGACAT AAATGTTTGG
ATCAATTCCT ATGGAGGGGA TGTCTATGCA GCTTCAAGAA TTTACACAGG TTTAAAGGAA
CACAAGGGAA AGGTTAAAGT AAAAATTGAT GGTGTGGCAA TTTCAGCAGC TTCAGTTATA
GCTATGGCAG GAGATGAAAT ACTTATGTCT CCAACATCAA TAATAATGCT ACACAACCCC
TGGGGAACTT TTCAAGGTGA AGCTAAGGAT TTAAGGCATG GAGCTGATGT GCTAGATGAA
GTAAAGGAAA CTATAATTAA TGCCTATCAG CTTAAAACAG GCAAATCAAG AGCAAAAATA
TCTCAGATGA TGGATGAGGA AACTTGGATG AGTGCAAAAA AAGCTGTAGC TGAAGGATTT
GCAGATGGAA TGCTTTATGA AAAGAATAAA GAAGAGCCAT TGGAAAATTC TTTTATGTTC
AGCAGGTTTG CTATTCAAAA TAGTGTTAAT AACAGGACTA GAGATTTTAT AAAACAGTAT
AATCAAAGGT TTAAAGAAAC CTATAAAGAT GAAGAAAAAA TAAAATTATT AAAAGCAAAA
CTTGCCTTAG AGTGTGAACT TTAG
|
|---|
| Protein sequence | MPFWNFKNSE ENEEEIELRI DGDIVMDDDF WSMLFGNDNV TPKGFMSELN KYKGKDINVW
INSYGGDVYA ASRIYTGLKE HKGKVKVKID GVAISAASVI AMAGDEILMS PTSIIMLHNP
WGTFQGEAKD LRHGADVLDE VKETIINAYQ LKTGKSRAKI SQMMDEETWM SAKKAVAEGF
ADGMLYEKNK EEPLENSFMF SRFAIQNSVN NRTRDFIKQY NQRFKETYKD EEKIKLLKAK
LALECEL
|
|---|
| |