Gene Cthe_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1702 
Symbol 
ID4808877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2024803 
End bp2025474 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content37% 
IMG OID640107115 
Productcell wall hydrolase/autolysin 
Protein accessionYP_001038116 
Protein GI125974206 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCCTGG CCATTAACGG TGGCCAAGAT TCAGGGGCAG TATATAAGGG AAGAAAGGAA 
AGCAATGATG TTCTAAGCAT AGGCAGAGCT GTAGCAGCAG AGGTAAGAAG GCATGGAGTT 
ACAGTTGATG AAACAAGAAC TTCAGATGCC ACAGTAAGCC TTAATGAGAG AAGTGCTTTT 
GAAAATAGGA ATAACTATGA TTACTTCATT TCTTTTCATA GGAATGCTTA TGATCCAGAA 
AAGGCAAAAG GTGTTGAAAC ATACACATAT TTAAATGGAG GAGCAAAATC AAAAGCATTA 
GCACAAAGGA TACAAACATC ACTTGCAGCA TTAGGATTTA CAGATAGAGG AGTTAAGGAA 
GCTAACTATC ATGTATTAAG AGAAACCAAG GCTCCAGCAG TGTTAATAGA GATAGGTTTT 
ATTGATAACA CAGGAGATAA TATTTTATTT GATTCAAAGA GAAATGAAAT AGTTAAGGCT 
ATAACTAAAG CAGTTCTTGC ACAATTAGGT ATTGGTTATA TTGAACCTTC AGCAAAAGCT 
CAAGTAGAAA ACGAGCAGAC TCTTTACAGG GTTATGGCAG GTTCATATAA GTCAAGAGAA 
AATGCTGAAA AGCAGGTGCA AAGGCTTAGG GCAGCAGGGT TTGATGCTGT AATTATGATA 
TTTAATAAGT AG
 
Protein sequence
MILAINGGQD SGAVYKGRKE SNDVLSIGRA VAAEVRRHGV TVDETRTSDA TVSLNERSAF 
ENRNNYDYFI SFHRNAYDPE KAKGVETYTY LNGGAKSKAL AQRIQTSLAA LGFTDRGVKE 
ANYHVLRETK APAVLIEIGF IDNTGDNILF DSKRNEIVKA ITKAVLAQLG IGYIEPSAKA 
QVENEQTLYR VMAGSYKSRE NAEKQVQRLR AAGFDAVIMI FNK