Gene Cthe_1689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1689 
Symbol 
ID4808864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp2013320 
End bp2014165 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content27% 
IMG OID640107103 
Producthypothetical protein 
Protein accessionYP_001038104 
Protein GI125974194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000531996 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATG AAGTTAATCT TTTAGAGTTT AAACCAAAGT TTTTAACAAA CCTAATAGCG 
TATTCCAGAG AAGAGAATGA TGGATACTTT TCATTTAGGT TTATAACTCC GGCACTTTCT
AATGAAACAA TATTGAATTG GACTTGTGTA GAAATAATCA AATTGCTTAA TGGAGAAACC
ACGCTAAAGG ATATAGTTGA TTATTTTGTT ACAAAGTATA AAGCTCCAAG GGAAGTAGTA
TATAATGATG TTGTTTCGAT AATCCAGAAT TTCTTGGATT TACAACTGTT AACTTGGGAA
GGAACTAATC CTTTTATAGA TAAATATAAA TTTGAATTAG GGTATGGATT TAGTGCATAT
TTAGCTGATT ATAAGGATGT AAGTAAGATT ATTGGTTACT TCAAGAAAGC TAACATAATG
GATGAAGAAA AAAGAAATAG TCAGTATAGA TATATTAACC CCTATGTAGA TGTAGTTAAC
CTAGTAAATG CAGAAACATT AAAATCAGGA TTCTTAACAA AAGCACAATT TATATTTGTA
TTAGAAAAAG AAGACAAAAT TAGAGGTGTA TTCTTTAGCA TGAATAATAT GAAAATAAAT
GTTAATTCAC TTATAGCTGT AATCATGGAT GATGATACAA ATGTGGAAGA TAAATTTTTA
GAATATGTAT TCTCCATGAT ACCACAGATA TCAAAAAAAT CAATAAAAAA GTTTAGGCTT
TATCTATCAG ATAATGATAA TATCGAAAAT ACAATATTTA AAGAAGGACA TTTTGTTAAA
GGTGTGACAT TAGAAGATGA GCTAGGATAT AACCAAAATG TTGTTGAATA TAACTATTGT
ATATAA
 
Protein sequence
MNNEVNLLEF KPKFLTNLIA YSREENDGYF SFRFITPALS NETILNWTCV EIIKLLNGET 
TLKDIVDYFV TKYKAPREVV YNDVVSIIQN FLDLQLLTWE GTNPFIDKYK FELGYGFSAY
LADYKDVSKI IGYFKKANIM DEEKRNSQYR YINPYVDVVN LVNAETLKSG FLTKAQFIFV
LEKEDKIRGV FFSMNNMKIN VNSLIAVIMD DDTNVEDKFL EYVFSMIPQI SKKSIKKFRL
YLSDNDNIEN TIFKEGHFVK GVTLEDELGY NQNVVEYNYC I