Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1689 |
Symbol | |
ID | 4808864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 2013320 |
End bp | 2014165 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 640107103 |
Product | hypothetical protein |
Protein accession | YP_001038104 |
Protein GI | 125974194 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000531996 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATG AAGTTAATCT TTTAGAGTTT AAACCAAAGT TTTTAACAAA CCTAATAGCG TATTCCAGAG AAGAGAATGA TGGATACTTT TCATTTAGGT TTATAACTCC GGCACTTTCT AATGAAACAA TATTGAATTG GACTTGTGTA GAAATAATCA AATTGCTTAA TGGAGAAACC ACGCTAAAGG ATATAGTTGA TTATTTTGTT ACAAAGTATA AAGCTCCAAG GGAAGTAGTA TATAATGATG TTGTTTCGAT AATCCAGAAT TTCTTGGATT TACAACTGTT AACTTGGGAA GGAACTAATC CTTTTATAGA TAAATATAAA TTTGAATTAG GGTATGGATT TAGTGCATAT TTAGCTGATT ATAAGGATGT AAGTAAGATT ATTGGTTACT TCAAGAAAGC TAACATAATG GATGAAGAAA AAAGAAATAG TCAGTATAGA TATATTAACC CCTATGTAGA TGTAGTTAAC CTAGTAAATG CAGAAACATT AAAATCAGGA TTCTTAACAA AAGCACAATT TATATTTGTA TTAGAAAAAG AAGACAAAAT TAGAGGTGTA TTCTTTAGCA TGAATAATAT GAAAATAAAT GTTAATTCAC TTATAGCTGT AATCATGGAT GATGATACAA ATGTGGAAGA TAAATTTTTA GAATATGTAT TCTCCATGAT ACCACAGATA TCAAAAAAAT CAATAAAAAA GTTTAGGCTT TATCTATCAG ATAATGATAA TATCGAAAAT ACAATATTTA AAGAAGGACA TTTTGTTAAA GGTGTGACAT TAGAAGATGA GCTAGGATAT AACCAAAATG TTGTTGAATA TAACTATTGT ATATAA
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Protein sequence | MNNEVNLLEF KPKFLTNLIA YSREENDGYF SFRFITPALS NETILNWTCV EIIKLLNGET TLKDIVDYFV TKYKAPREVV YNDVVSIIQN FLDLQLLTWE GTNPFIDKYK FELGYGFSAY LADYKDVSKI IGYFKKANIM DEEKRNSQYR YINPYVDVVN LVNAETLKSG FLTKAQFIFV LEKEDKIRGV FFSMNNMKIN VNSLIAVIMD DDTNVEDKFL EYVFSMIPQI SKKSIKKFRL YLSDNDNIEN TIFKEGHFVK GVTLEDELGY NQNVVEYNYC I
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