Gene Cthe_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1678 
Symbol 
ID4808928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp2003458 
End bp2004093 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content39% 
IMG OID640107093 
Producthypothetical protein 
Protein accessionYP_001038094 
Protein GI125974184 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATATG GACCAGATCC AAGTTCCATT TATCCAAATG AAAACATCAA AAGCATATGC 
TACATTAAAA ATTTAATCAC ACGTCCAAAC ATTATAGTAG GCGATTACAC CTACTATGAT 
GATATCAATG GTGCGGAACG ATTTGAAGAG CACGTTACAC ATCACTATGA ATTTATAGGT 
GATAAGCTCA TCATCGGGAA ATTCTGCGCT ATAGCAAAAG GTATCGAATT TGTAATGAAC 
GGTGCGAATC ATAGAATGTG CAGCGTCACT ACTTATCCTT TTAACATCAT GGGGCATGGT 
TGGGAAAAGG CAACTCCGAC ACTTGGGGAT TTACCTTTCA AAGGAGATAC TGTTGTAGGA 
AATGATGTGT GGATAGGTCA AAATGTCACT GTAATGCCTG GCGTGCATAT TGGTGATGGA 
GCAATTGTAG CTGCCAATTC AGTAGTTACA AAGGACATAC CGGCTTATCA TATTGCAGGC 
GGAAACCCCG TCAGAATTAC TAAGAAAAGA TTCGACGATG ACCTTATAGA CTATCTGCTG 
AAATTAAAAT GGTGGGATTG GCCAGCACGT AAAATATTTG ATAACCTTGA GGTACTGTGC 
AGCGGTAACC TTTCAAGAAT TAAGGAGATA AAATGA
 
Protein sequence
MQYGPDPSSI YPNENIKSIC YIKNLITRPN IIVGDYTYYD DINGAERFEE HVTHHYEFIG 
DKLIIGKFCA IAKGIEFVMN GANHRMCSVT TYPFNIMGHG WEKATPTLGD LPFKGDTVVG 
NDVWIGQNVT VMPGVHIGDG AIVAANSVVT KDIPAYHIAG GNPVRITKKR FDDDLIDYLL 
KLKWWDWPAR KIFDNLEVLC SGNLSRIKEI K