Gene Cthe_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1664 
Symbol 
ID4808914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1990973 
End bp1991650 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content29% 
IMG OID640107079 
ProductMerR family transcriptional regulator 
Protein accessionYP_001038080 
Protein GI125974170 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGGTA TAACTGTCAG AACTCTACAT TATTATGATG AAGTCGGTTT ATTAAAACCA 
TCTAAGATTA CTGAAACAGG GCATAGATTA TATGACATAC AGAGTGTTAC AACATTATAT 
CAAATAATTT CTTTGAAAGA CATGGGATTT AACCTTGATG AGATAAAGGA TCTGATTCAT 
GATAGATATA TAGATATTCG AAAATTCGTT GAGATCCAAA TTTCAAAAGT TCAAGAGGAA 
ATTGCCCAGA AGCAGTTACT TTTCAGTAAG CTACTAAAAC TAAAACAGGA GCTTAAAGAT 
AATAAGAATA TCTCATTAGA TGATTTTAAA GCAATCGTCC CATTTATTAA TTCCTCAGCA 
GACAAATACA TTACTAAAGA ACAGTTAGAT AAAATAAAAA ATAACTTAGA AAGAGATAAA 
GCAGAATCAG AAGGAGCAAC AGAATGGCTG GAATTCATTT CAAAACTTAA TTATTGTTAC 
AAGAACAAAT TGCCTAATAC AGATTTAAAT GCAATTGAAT GCATTAATTA CTGGAAAGAT 
TTTATGAACA AGTCAATAGG TGAAGATGAG AAACTTAAGA ATTCCATATT CTCATTTCAT 
GCTTCTTTGG ATAATTCCCA GCTTAGATAT GGACTTACTG ATGATCTATA CAAATATCTA 
ATGGAGTTAA TGAAATAA
 
Protein sequence
MTGITVRTLH YYDEVGLLKP SKITETGHRL YDIQSVTTLY QIISLKDMGF NLDEIKDLIH 
DRYIDIRKFV EIQISKVQEE IAQKQLLFSK LLKLKQELKD NKNISLDDFK AIVPFINSSA 
DKYITKEQLD KIKNNLERDK AESEGATEWL EFISKLNYCY KNKLPNTDLN AIECINYWKD 
FMNKSIGEDE KLKNSIFSFH ASLDNSQLRY GLTDDLYKYL MELMK