Gene Cthe_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1663 
Symbol 
ID4808913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1990391 
End bp1990819 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content36% 
IMG OID640107078 
Productendoribonuclease L-PSP 
Protein accessionYP_001038079 
Protein GI125974169 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGGT TAAAGGTGAA ACATAGTAAT CCGGAGGGAT TATTTGATTC AAGAGTTTTT 
AGTCAAGTGG TTACAGTTAG CGGTAATGCA AAGACAATAT ATATCGGTGG ACAAAATGCT
ATTAACTCTG AGGGACAATT AATAGGTCGG GACAATTTAG AACTGCAAAC AAAACAAGTT
TTAGAAAATA TTAAAATAGC TTTGGCTTCC GAAAATGCAA CTTTCAATGA TGTTATAAAG
CTCAATATTT ACATGGTTAA CGGGTGCGAT CCGGCAGTCG GATTAAAATC ATTTAAGGAA
ACAATTGGCG AGATGGAAAA GCCTCCTTTG ATCACAGTTC TCAAAGTCGC TGGTCTTACA
AATCCTTTAT GCTTGATTGA AATTGATGCA ATTGCTGTAG TTGAAGAAAG AGAGGATTGC
ATGGAATGA
 
Protein sequence
MSRLKVKHSN PEGLFDSRVF SQVVTVSGNA KTIYIGGQNA INSEGQLIGR DNLELQTKQV 
LENIKIALAS ENATFNDVIK LNIYMVNGCD PAVGLKSFKE TIGEMEKPPL ITVLKVAGLT
NPLCLIEIDA IAVVEEREDC ME