| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1658 |
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| Symbol | |
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| ID | 4808908 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1984293 |
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| End bp | 1985645 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640107073 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001038074 |
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| Protein GI | 125974164 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.552595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAAAT ATATAAGAAA ACTGAAATCA TTATCATACC CACAGATAAT AGCACTTGGC
TACTTTCTGA TAATAATTGC CGGGACATTT TTGCTGTCAT TGCCGATAGC CAGCCGCAAT
AATTTATTTC CCGGATTAAT TAATGCACTT TTTACAGCAA CCTCTGCTAC TTGTGTAACA
GGGCTTGTTG TTTTTGACAC CTATACACAA TGGTCGCTAT TTGGACAAGT AGTTATTTTA
CTGCTGATTC AAATAGGTGG CTTAGGGTTT ATGACGGTTG TCACAATGTT TTCTATTTTT
TTAAAAAGAA AAATCGGGCT GAAAGAAAGG GGACTTTTAC GTGAAAGTAT AAATGCTATG
TATATCGGTG GGATTGTACG TCTGACCAAA AGAATATTGC TTGGCACTTT GCTGTTTGAA
GGTATTGGTG CAGTATTGCT ATCATTGAGG TTTATACCCA AAATGGGCTT GCTGGAAGGT
ATATATAATG GCATTTTTCA CTCGGTTTCA GCTTTTTGCA ATGCCGGGTT TGACATTATG
GGAAAGTACG GCAAGTATTC ATCGCTAACA AATTTCGCCG GGGATGCGGT TGTTAACTTA
ACAATTATTT CACTCATCAT TGTCGGAGGA ATAGGGTTCT TTGTATGGGA TGATATTGAG
AAAAATAAAT ATCATTTTAG AAAATATCAG CTACATACAA AAATAGTTTT AACGATGACC
GCAATTCTTA TAGTGTCAGG GACGATATGC TTTTATATTT TTGAAAGAAA TAACCTTCTT
TATGGGATGA CTACAGGAGA AAAAGTTTTA GTCTCTCTCT TTGGCGCAGT TACGCCCAGA
ACAGCAGGCT TCAATACTGT TGACGTTGCA TCATTAACCT CTGCAAGTAA ACTTCTAACT
ATTGTGTTGA TGTTTATAGG CGGCAGTCCC GGATCTACTG CCGGTGGGAT CAAGACTACT
ACTTTAGCGG TTATTATGAT TTCGCTGTGG TCAAGCTTGA AAAATAGGAA GGGTGATAAT
ATATTTGGCA GGAGACTGGA AGATAATGCA CTAAAGAGGT CGTCTGCCGT TGTGACAGTC
AATATACTTC TTATACTGAG TGCGGCTTTA CTTATTAGTG CTACAAATAA AGCTTTAGGA
CTTGACGCTG TTTTGTTTGA GGTTACATCT GCAATTGGTA CTGTTGGTCT TTCTACGGGA
ATCACAGGTG GTCTGAATAC CTTTGCAAAA ATAATTATCA TACTATTGAT GTATAGCGGC
AGAGTCGGAA GTCTTTCTTT TGCTTTGCTG TTTACAGAAC ATGGAGTGAC GTCATCTATA
CAGAATCCGG TGGAAAAAAT AAATATAGGA TAG
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| Protein sequence | MRKYIRKLKS LSYPQIIALG YFLIIIAGTF LLSLPIASRN NLFPGLINAL FTATSATCVT
GLVVFDTYTQ WSLFGQVVIL LLIQIGGLGF MTVVTMFSIF LKRKIGLKER GLLRESINAM
YIGGIVRLTK RILLGTLLFE GIGAVLLSLR FIPKMGLLEG IYNGIFHSVS AFCNAGFDIM
GKYGKYSSLT NFAGDAVVNL TIISLIIVGG IGFFVWDDIE KNKYHFRKYQ LHTKIVLTMT
AILIVSGTIC FYIFERNNLL YGMTTGEKVL VSLFGAVTPR TAGFNTVDVA SLTSASKLLT
IVLMFIGGSP GSTAGGIKTT TLAVIMISLW SSLKNRKGDN IFGRRLEDNA LKRSSAVVTV
NILLILSAAL LISATNKALG LDAVLFEVTS AIGTVGLSTG ITGGLNTFAK IIIILLMYSG
RVGSLSFALL FTEHGVTSSI QNPVEKINIG
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