| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1656 |
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| Symbol | |
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| ID | 4808906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1983046 |
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| End bp | 1983882 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640107071 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_001038072 |
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| Protein GI | 125974162 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.629851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATA GAAATGAGAA GAAACTCAGC ATAACAAGGC AAGCAGAATT ATTGAGCTTA
AACCGTACGA GCGTTTACTA CAAGCCTGCT CCGGTAAATG AGGAGGAATA CCTGATTAAG
CGTATCATTG ATGAAATTTA CGCGTCTTAT CCGGAATATG GCTATCGCAG GATGACAAGT
ATATTGAACA AGGATTATCA CATTCATATC AATCGAAAAC GGACCCGGCG TTATATGAGG
GAAATGGGCA TACATGGATT CTGTCCTGGC CCCAACCTCA GCAAACGAAT ACATGGTAAG
AATTTGTATC CATATCTGTT GAGAAACTTG AAAATTGATC ATCCTAATCA GGTATGGTCC
ATAGATGTGA CCTATTGCCG AATGAAACGC GGTTTCATGT ATATGGTTGC AATAATAGAC
TGGTATTCTC GGTATATTGT TGGGTTTGAA CTATCAAACA CTCTTGATAA GACATTCGTC
ATAGAAGCAA TCCAAAAGGC CATAAAGCGA TATGGCAAGC CTGAAATCAT GAACAGTGAT
CAAGGCTCAC AGTTTACCAG TGATGATTAC ATAAATCTAT TAAAAAATAA CGGTATCAAA
ATATCTATGG ATGGAAAAGG AAGAGCATTA GACAACCAAA GGATAGAACG ATTTTTCCGT
TCCTACAAGT GGGAGAAACT TTATCTTGAA GAGTGCGAAA CGGTACAACA ACTTAGACAA
ATCACAAAGG AATATGTGGA GCACTATAAC CATAGGAGAC CGCACCAGTC ATTGGATTAC
AAAACACCGG CAGAGTATTA CTTTGGAGGA TATGACCAGC TACTGGCAGT TGTATAG
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| Protein sequence | MIDRNEKKLS ITRQAELLSL NRTSVYYKPA PVNEEEYLIK RIIDEIYASY PEYGYRRMTS
ILNKDYHIHI NRKRTRRYMR EMGIHGFCPG PNLSKRIHGK NLYPYLLRNL KIDHPNQVWS
IDVTYCRMKR GFMYMVAIID WYSRYIVGFE LSNTLDKTFV IEAIQKAIKR YGKPEIMNSD
QGSQFTSDDY INLLKNNGIK ISMDGKGRAL DNQRIERFFR SYKWEKLYLE ECETVQQLRQ
ITKEYVEHYN HRRPHQSLDY KTPAEYYFGG YDQLLAVV
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