| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1653 |
|---|
| Symbol | |
|---|
| ID | 4808903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1978551 |
|---|
| End bp | 1979909 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640107068 |
|---|
| Product | SNF2-related protein |
|---|
| Protein accession | YP_001038069 |
|---|
| Protein GI | 125974159 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTGCA GCGCTCCTGA TGGAAATGGG CTGAAAAGTA CCGGGAAAAC TCTTGTCTCA
ATCGCCATTA TAGGAGCATT GCTTGCTGCA GGAAGAATAA AACGTGTGCT GATTGTTGCG
CCACTTTCCA TTCTGGGAGT GTGGGAAGAC GAGTTTAAAC GGTTCGCAGA TTTCCCATAT
CAGCTTATAG TCCTTAATGG CACGATTCAA AAGAAAATCC AACAGCTAAG ATTTTTAACT
GGCGAAGGTG TCCATGTGGT GGTAGTCAAC TATGAATCTG CATGGAGAAT GGAAAAGGAA
CTGGCTAATT GGCATCCTGA CCTTATCATT GCTGATGAAG GACACAAAAT TAAAACTCAT
AATACTTCTG TTTCAAAGGC AATGCACCGG TTAGGCTTGC TTGCCCGGTA TCGGCTCTTA
CTGACAGGAA CGGTTATAAC CAACAAAGCC ATAGATGTAT TCAGCCAATA TAAGTTTCTC
GATCCACGCA TCTTTGGTAA CAGCTTCTAT GCCTTCAGAA ACCGGTATTT CAATATGGTT
GGCTATGGCA ACCATACGCC AGTGCTGAAA AAATCAATGG AACAGGATTT GATGAAAAGG
ATTCACAGCA TTGCATTCCG GGCGACCAAA GCGGAGTGTC TGGATTTGCC GGAAACCACC
GATATTATTC GCCATATTGA GCTTGAGCCT GTCACTTTAA AGAAATATAA AGAGCTTGTC
AAACAAAGCT ATACTGAGCT GTCAGCAGGA GAAGTAACAG CTACAAACAT ACTGACACGC
TTGCTTCGTC TTTCGCAATT AACCGGCGGC TTCATCGGAA GCGATGACGG TGGGAAAATC
GAGCAAGTCA GTGATGCCAA GTTGAAAGCT CTTGAAGATA TCCTTGAAAG CAGTATTCAA
GAAGGACATA AGCTGGTTGT CATAGCAAGG TTTATCCCTG AAATTCATGC TATATGCAGG
TTGCTGGAGA AAAAGAACAT CGGCTATGCG TGTATTTATG GTGCGACTAA GGATCGCCAA
GAACAAGTAA ACCGGTTTCA ATATGATCCC GACTGCATGG TGTTTGTAGG CCAGATTGCA
ACCGCTGGAC TCGGTATTAC GCTGACTGCT GCAAGCACAA TGGTATTTTA CTCCCTTGAT
TATTCCATGT CGAATTTCGA GCAGACAAAG GCCCGCATCC ATAGAGTTGG ACAGAAGAAT
GGCTGCACAT ATATCTACCT TATTGCCAAG GGTACTGTGG ATTCAAAAAT CCTGACTGCC
CTACGCAATA AGGCAGATCT TGCAAAAATG CTGATAGACG ACTACCGCAA AGGAGCAAAT
CCTTTTGCCC CAGAGGGAGG TGAAAGCTAT GAGCGATAA
|
|---|
| Protein sequence | MGCSAPDGNG LKSTGKTLVS IAIIGALLAA GRIKRVLIVA PLSILGVWED EFKRFADFPY
QLIVLNGTIQ KKIQQLRFLT GEGVHVVVVN YESAWRMEKE LANWHPDLII ADEGHKIKTH
NTSVSKAMHR LGLLARYRLL LTGTVITNKA IDVFSQYKFL DPRIFGNSFY AFRNRYFNMV
GYGNHTPVLK KSMEQDLMKR IHSIAFRATK AECLDLPETT DIIRHIELEP VTLKKYKELV
KQSYTELSAG EVTATNILTR LLRLSQLTGG FIGSDDGGKI EQVSDAKLKA LEDILESSIQ
EGHKLVVIAR FIPEIHAICR LLEKKNIGYA CIYGATKDRQ EQVNRFQYDP DCMVFVGQIA
TAGLGITLTA ASTMVFYSLD YSMSNFEQTK ARIHRVGQKN GCTYIYLIAK GTVDSKILTA
LRNKADLAKM LIDDYRKGAN PFAPEGGESY ER
|
|---|
| |