| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1616 |
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| Symbol | |
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| ID | 4809311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1945599 |
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| End bp | 1948121 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107032 |
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| Product | phage minor structural protein |
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| Protein accession | YP_001038033 |
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| Protein GI | 125974123 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4926] Phage-related protein |
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| TIGRFAM ID | [TIGR01665] phage minor structural protein, N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGATAA AATCAATTCT AACGAGCCAA GAGGATTTTA CCGGTGAGTT TCCTGTAACA
TCAAGGACGT CTGCTTTATG GCGATTTAAT GAAAAAACAC CAGACGAAAA TCTTCTGCTT
ATGGATTCAT CGGGACATGG CAGACATTTT ACCATCTCCG GCTGGTCAGG GACATCGGCA
AACCTTATTG CTGGAAGATT CGGAAGATAC TTTAGGCAAA ATATTGTTAA TCCGACTTCT
GAAAAGACCC ATCTTATAGC AGAAAATGAT GGGAGTTTCT TTAGCAATCT GGGCGAAAAG
ATTGTTGTAG GCGGTTGGAT TAATCCTACC ACCTATTCGG TCGGCCAGAC ATATATATCC
ATATTCAATA CCCGCCAAGG ACCTGGTCAG CCAATTCTTT ATGTTTCACT TTATCAAGGA
AGACTTAGGC TGATGTTGTA TAACTCCTCC GGCACACTAA TCTACGACCA GAGTGAAACA
GCTACCATTA CCTTAAAAAA CGGCGGCTGG TACTTTATCG CCTCCATCAT TGAAGTAAAC
AACAAAAAGG TGCAGAACAT CATATGCGAT CGCAGCGACG GGGCAACCTG GGTGTCACCT
GTGCGTTCCT TTTCGGGAGA GCTGAATCGG GAATGTATAG CAGACATTAT TATGGGGATG
CATGCAAATA CCTACTACTA TGCCGGAGGC TTCGACGACT GGTTTCTGGA AACGGACTCA
CAGCTTACAG CTGATGATTT GCTGTTATAT TTTAAGTCGT CTTTACAAGC AAACGGTGGG
GATGCGGCTT CGGATGTAGA TGCTTTGGCA GAGCCTGGCG CAGTCACCCT TAAAGCAACA
GATGGCGAGT ATCCTGCAAG TGGCGTACTT TATACAAGGG CGGTTCCATG TGCATTATCG
GGCAGCGGTC GTGTAGCTGT GACAAGCGAA TATACTGCAG GTGTTACTTC AGTGTCTCTA
GTAGAGACCA GCACAAGCGA TGATCTTGAA GAATGGTCTG CATGGCAGGC TGTGGGAACC
AGCGGTGAAC TTCAATCGCC AAATCGGCAA TATATAAGGT TCCGTGTTAC CCTTACCAGC
AGCGATCCGT TGAAGACGCC AAAACTTCTG GAAATACAGC TTCATGATAT ACCGAAAGCG
CCCTATGAGA AATTAGGCTT TGCCCGTCCT GTGATTTTGG ACAAAAACGG AGCATGGGAA
GCTGTTCTTG AAAATGCCTT TGATATCATT GTCACTGGTG AGGTGAACGG CGCGGATACG
CTGGAATTCA AGCTTCCGTT CCATGATCCA AAAAGAAGCA CACTGGAAAA TGAAAAACAA
GTGCAAATCG TAAATGACAT TTACCGGATC CGAACCTTAA CGGACAATAA AGGCGAAGAT
GGGCGTGTTA TCACGCAAGT ATATGCTGAA GCGGTATTTT ACGATCTGTC TTTCAGTGCG
GAAAAAGAAC CTAGAGAATT CAATGCAGAT ACTGCAGATG TTCCGATGCA ATATGCACTT
TTGGGTACAG GCTGGACAGT AGGAAATGTT ACTGTCACTA CGAAACGGAC ATGGCAGTGT
ACAGAAAAAA ATGCCTTATC CATCCTTCGC ACCGTACAGA ATATTTATGG CGGCGATCTG
GTGTTTGACA GCGCCAACCG CCAGGTACAC CTTTTGACTT TTAGTGGTAC TGATAGCGGA
GCGCTTTTTT CATATAGAAA GAATTTGAAA AGTATTCAGC GGGTAGTCGA TACACGTGAA
TTAGTGACAA AGCTCTATGC TTATGGAAAG GACGGATTGA CCTTCGCTTC AATTAATGGA
GGTAAGGAAT ACGTGGAAGA TTACACTTTT TCCAGTGAAG TGAGGGTGTC GACGCTTGAT
TGTTCGTCGT TTACAAATCC GTATCAGATG CTGGAATATG CAAAAATGCG GCTTGCAGAA
TATTCGAAGC CTCGCGTCTC TTATGTGCTG TCGGCAATGG ATTTATCTGC GCTAACCGGT
TATGAGCACG AAGCATGGAA ACTGGGTGAT ATTGTTACAG TGGACGATAA AGAACTAGGC
CTTTTGGTAA AGACTCGTGT TGTGAGAAGG CAGTATAACT TGCAGGAACC ATGGAAAACA
GTGATTGAGC TTTCAACTAA ACTGCGGGAA CTTGGCGATT CTTCAGCACA GTGGGACAAG
GCAGCGGATG CGCTGTCCTC AGCAGAGTTG ATAAACCGTC AGGAAATTAA AGATATGGTA
CCATTCAACC ATCTGCGCAA TTCCAGAGCG GATGATGGTT TTGCCTACTG GGTCAATTCC
GGTTTTGAAG TGGATACTGA AAATGGTGTT TCGGGAACTG CTTCCTTCAA GGCTGTCGGT
GTACCTGGTA TGAAAAAGAG CCTTTCACAG ACGGTATATC CAGCAACGCG TAAAAGCTAC
ACTTTTTCAG CACAAATTGC TTCCGAAAGC CTCGAAAAGG GTGAAAACGG CCAAGTTGGT
GTTGAGATAG TCATTGAATA CGAGGACGGT ACAACAGAAA CAAGATTTAT AGACCTGATT
TGA
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| Protein sequence | MAIKSILTSQ EDFTGEFPVT SRTSALWRFN EKTPDENLLL MDSSGHGRHF TISGWSGTSA
NLIAGRFGRY FRQNIVNPTS EKTHLIAEND GSFFSNLGEK IVVGGWINPT TYSVGQTYIS
IFNTRQGPGQ PILYVSLYQG RLRLMLYNSS GTLIYDQSET ATITLKNGGW YFIASIIEVN
NKKVQNIICD RSDGATWVSP VRSFSGELNR ECIADIIMGM HANTYYYAGG FDDWFLETDS
QLTADDLLLY FKSSLQANGG DAASDVDALA EPGAVTLKAT DGEYPASGVL YTRAVPCALS
GSGRVAVTSE YTAGVTSVSL VETSTSDDLE EWSAWQAVGT SGELQSPNRQ YIRFRVTLTS
SDPLKTPKLL EIQLHDIPKA PYEKLGFARP VILDKNGAWE AVLENAFDII VTGEVNGADT
LEFKLPFHDP KRSTLENEKQ VQIVNDIYRI RTLTDNKGED GRVITQVYAE AVFYDLSFSA
EKEPREFNAD TADVPMQYAL LGTGWTVGNV TVTTKRTWQC TEKNALSILR TVQNIYGGDL
VFDSANRQVH LLTFSGTDSG ALFSYRKNLK SIQRVVDTRE LVTKLYAYGK DGLTFASING
GKEYVEDYTF SSEVRVSTLD CSSFTNPYQM LEYAKMRLAE YSKPRVSYVL SAMDLSALTG
YEHEAWKLGD IVTVDDKELG LLVKTRVVRR QYNLQEPWKT VIELSTKLRE LGDSSAQWDK
AADALSSAEL INRQEIKDMV PFNHLRNSRA DDGFAYWVNS GFEVDTENGV SGTASFKAVG
VPGMKKSLSQ TVYPATRKSY TFSAQIASES LEKGENGQVG VEIVIEYEDG TTETRFIDLI
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