| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1611 |
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| Symbol | |
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| ID | 4809601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1940837 |
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| End bp | 1941841 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640107027 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001038028 |
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| Protein GI | 125974118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1652] Uncharacterized protein containing LysM domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000139366 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTTT TTACAAAATA CATGACGCGA AACGATTGCT ATACAGCAGG TCGGAAAATC
ACGCCTAAAG GAATCATGGT ACATTCGACG GCTGTGCCGG GTGTAATGGC GGCTGAGTGG
TTTTCCCGTT GGAACAAATC TTACAAGGCC GGCGAAATAA ATAGGCAGGT ATGTGTTCAC
GCTTTTGTAG ACGATAAAGA GGTTTGGCAA TACCTGCCTT GGGATCATCG CGGGTGGCAT
GCGGGAGGAG CAGCAAACAA TACCCATATT GGCTTTGAAA TCTGTGAGCC TGCTGGGTTT
TCGTATAAAT CCGGGTCGGT GATGGTGGGT TATGATGCAG CAAAGCAGGA AGATTATTTC
TTTAAAGCGT GGCAGAATGC GGTTGAACTC TGCGTTATGC TCTGCAGGGA GTACGGACTT
GACGAGAATG ACATCATCTG CCACTCCGAA GGATACAAGC TCGGTATTGC CAGCAACCAT
GCTGATGTGA TGCACTGGTT CCCCAAGCAT GGGGAGAATA TGGACACTTT CCGAAAAGCA
GTGAAAAAAG CGCTGGAGAA CAGTACAGAT AACAATACTG ATATTGGAAT TGGAGATATG
GTGGAGTTTA AGGTCAGTGT AAAGAATTAC TACCCCGGCA GTGTGGAAGT TCCAACGTGG
GTCAAAAATG ACTATTACCA CAGGGTCACA CAGACTTTAT ACAAAGGCAA GCCGGTCATA
AAAGGCGGCA AAGAATGTGT ATTGCTTGGC AAAAAGGTTA AGAAATCCGG CGGTCAAGAA
ATCGCAGGCA TAAACACTTG GGTAGCAAAA GAAAACCTTG TAATTGTAAA CAGCATTCCT
GATAACAAGG GCAATAGAAC CTATACAGTG CAAAAAGGCG ATACCTTATG GAGAATAGCG
GAAAAAGAAC TTGGTAGAGG AACAAGATAT CCGGAGATTA AGAAACTCAA TGGCCTGACT
TCAGATACTA TTTACCCCGG ACAAGTTCTG AAATTGCCGG AATAA
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| Protein sequence | MKLFTKYMTR NDCYTAGRKI TPKGIMVHST AVPGVMAAEW FSRWNKSYKA GEINRQVCVH
AFVDDKEVWQ YLPWDHRGWH AGGAANNTHI GFEICEPAGF SYKSGSVMVG YDAAKQEDYF
FKAWQNAVEL CVMLCREYGL DENDIICHSE GYKLGIASNH ADVMHWFPKH GENMDTFRKA
VKKALENSTD NNTDIGIGDM VEFKVSVKNY YPGSVEVPTW VKNDYYHRVT QTLYKGKPVI
KGGKECVLLG KKVKKSGGQE IAGINTWVAK ENLVIVNSIP DNKGNRTYTV QKGDTLWRIA
EKELGRGTRY PEIKKLNGLT SDTIYPGQVL KLPE
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