Gene Cthe_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1583 
Symbol 
ID4809574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp1912629 
End bp1913297 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content45% 
IMG OID640107001 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_001038002 
Protein GI125974092 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACAC AAGACATATT ATCCCATGTG GATCACACAT TACTGTTGCA AACTGCTACC 
TGGCCCGAAA TCCAGGCACT TTGTGACGAT GCTATCAAGT ATCAAACCGC TTCAGTATGC 
ATTCCGCCAT GCTATGTGGC CCGCGCAAAA GAGTATGTAG GCGACCGCAT GGTTATCTGT 
ACCGTTATCG GCTTTCCCAA TGGCAATATG ACTACTGCCG CCAAAGTTTT TGAAACCCAG 
GACGCCATAG CAAACGGCGC AGATGAAATC GATATGGTCA TCAATATAGG CGCCTTGAAA 
AACAAAGAAT ACGACTATGT ACTTAAGGAA ATTAAAGCCA TTAAGCAAGC CTGCGGTGAA 
CGTATTCTGA AAGTCATCAT TGAAACATGC CTGCTTACTG AAGAAGAAAA GATTGTTATG 
TGCGATTTGG TAACCAGATC CGGGGCAGAC TATATCAAAA CCAGTACGGG ATTTTCCACT 
GCAGGCGCCA CCTTTGAGGA TATTGAGCTG TTTGCAAAAC ATGTTGGCCC CAATGTCAAA 
ATTAAGGCAG CGGGTGGCAT TTCCAATTTT AATGATGCCA GGAAATATAT AGAGCTCGGT 
GCTGACCGTC TGGGAACCAG CCGTCTGGTG AAACTCATGA AATCCCAGTC GTATGACGGT 
TTGTATTGA
 
Protein sequence
MNTQDILSHV DHTLLLQTAT WPEIQALCDD AIKYQTASVC IPPCYVARAK EYVGDRMVIC 
TVIGFPNGNM TTAAKVFETQ DAIANGADEI DMVINIGALK NKEYDYVLKE IKAIKQACGE 
RILKVIIETC LLTEEEKIVM CDLVTRSGAD YIKTSTGFST AGATFEDIEL FAKHVGPNVK 
IKAAGGISNF NDARKYIELG ADRLGTSRLV KLMKSQSYDG LY