Gene Cthe_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1573 
Symbol 
ID4810080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1901492 
End bp1902346 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content46% 
IMG OID640106991 
Productnitrogenase iron protein subunit NifH 
Protein accessionYP_001037992 
Protein GI125974082 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAG AAATAAGACA AATCGCTATT TATGGAAAGG GCGGTATTGG AAAATCCACC 
ACCACGCAAA ACCTTACCGC AGGACTTGCG GAAAGCGGTA AAAAAATCAT GGTGGTGGGA
TGTGATCCCA AGGCCGATTC CACCAGACTT TTATTGGGAA CCTTTGCACA GCGAACTGTC
CTGGATACGC TGCGTGAGAC CGGGGAAGAT GTGAAACTTG AAAATATTGT GCGCATCGGA
TTCGGCGGAA TAAAATGTGT GGAGTCCGGA GGGCCGGAAC CCGGTGTTGG ATGTGCCGGA
AGGGGAATTA TTACTTCCAT AGGTTTGCTG GAACAGCTGG GTGCCTATGA TGATGATCTG
GACTATGTAT TTTATGACGT ACTTGGAGAT GTCGTTTGTG GCGGATTTGC CATGCCGATT
CGTGAAGGAA AAGCCAAAGA AATTTATATT GTGGCAAGTG GTGAGATGAT GGCATTGTAT
GCTGCAAACA ATATTGCAAA GGGAATTGCA AAGTTTGCAC AAAAGGGTGG TGTGAGACTG
GGAGGTATTA TATGCAACAG CCGTAATGTC GACCGGGAAA TCGACCTTCT CCGTGCTTTT
TGTGCAGAAC TGGGAACTCA ACTGATTTAT TTTGTTCCCA GGGACAATGT GGTACAGCGT
GCTGAAATCA ACAGAAAAAC TGTCATCGAG TATGCGCCGG ATTCGCAGCA GGCCGACGAA
TACAGGCGGT TGGCAAAAGC GATAGATGAG AATACTTATT TTACAATACC CAAACCCCTG
TCCCAGGAAC GTTTGGAGGA AATTTTGCTG GAGTATGGGT TAATGGAATC CCTGAAGGAT
GATTATCGAA TTTGA
 
Protein sequence
MSKEIRQIAI YGKGGIGKST TTQNLTAGLA ESGKKIMVVG CDPKADSTRL LLGTFAQRTV 
LDTLRETGED VKLENIVRIG FGGIKCVESG GPEPGVGCAG RGIITSIGLL EQLGAYDDDL
DYVFYDVLGD VVCGGFAMPI REGKAKEIYI VASGEMMALY AANNIAKGIA KFAQKGGVRL
GGIICNSRNV DREIDLLRAF CAELGTQLIY FVPRDNVVQR AEINRKTVIE YAPDSQQADE
YRRLAKAIDE NTYFTIPKPL SQERLEEILL EYGLMESLKD DYRI