Gene Cthe_1568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1568 
Symbol 
ID4810075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1895974 
End bp1896849 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content46% 
IMG OID640106986 
Productradical SAM family protein 
Protein accessionYP_001037987 
Protein GI125974077 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID[TIGR01290] nitrogenase cofactor biosynthesis protein NifB 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTTA CATATGAAGA TCTGAAAAAA AATCATCCCT GTTTTGCGGC GGGAGCTAAA 
AACAATAAGG GTCGTGTTCA TTTGCCGGTA TCTTACGGGT GCAATATTGC CTGCAATTTT
TGCAAGCGTG ACATCAACGA TACGGATAAC CGTCCCGGGG TTGCAAGCGG AATAATCACA
CCACAGGAAG CTGTAGATGC AGTGAGAAGA GCGGTGGAAC TTTGCCCCGA TATTACTGTA
GCGGGAGTGG CCGGACCGGG TGATACCCTG GCAACACCTT ATGCACTGCA GACCTTTCGC
CTTATCAAGC AGGAATTCCC TCATATTATA AAATGCATGA GCACCAACGG CCTTCTTCTG
CCGGAATACG CTGATGAGAT TATTGATGTG GGCATTGACA GCCTGACTGT TACCGTCAAT
GCAGTTGACC CGGAAATACA GGCACAGATT TGCGAGGGTA TTGTCTATCA TGGTAAGCGC
TATACAGGAA TTGAAGCCGC AAAAATTCTT ATTCAAAATC AACTTGCCGG AATTAAGAAA
GTATCCCAAT CAGGAATAAC CATAAAAGTA AATACAGTGT TAATCCCGGA GATCAACGCG
GATCATGTGG TGGAAGTGGC AAAGACTGTT GCACAGCACG GAGCAAAAAT CTATAACATT
ATTCCGCTGA TTCCCCAGCA CAAGCTTAGC TGGTGCAGCA CACCGGGATG TGATCTCATC
AGCAAAGTGA GGTCAGAAGC CCAGGCCTAT ATCAATGTAT TCCGGCATTG CCAGCGTTGT
AGAGCAGATG CTGCCGGAAT TCCAGGCGGT AAGGATATAT CCTCAAGTTT ATATATTAGG
CCTGTAAAAT TGGAAAATAC CTTTTCCCAT GGCTAA
 
Protein sequence
MAFTYEDLKK NHPCFAAGAK NNKGRVHLPV SYGCNIACNF CKRDINDTDN RPGVASGIIT 
PQEAVDAVRR AVELCPDITV AGVAGPGDTL ATPYALQTFR LIKQEFPHII KCMSTNGLLL
PEYADEIIDV GIDSLTVTVN AVDPEIQAQI CEGIVYHGKR YTGIEAAKIL IQNQLAGIKK
VSQSGITIKV NTVLIPEINA DHVVEVAKTV AQHGAKIYNI IPLIPQHKLS WCSTPGCDLI
SKVRSEAQAY INVFRHCQRC RADAAGIPGG KDISSSLYIR PVKLENTFSH G