Gene Cthe_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1549 
Symbol 
ID4810056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1877584 
End bp1878255 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content34% 
IMG OID640106968 
Productmethyltransferase type 12 
Protein accessionYP_001037969 
Protein GI125974059 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTATAG AAGAACAGTT TAATTTGATT GCAAAAGAGT ATGATTGTAA TCGTAGGAAG 
TTTATTCCTT GCTTTGATGA TTATTATGAA AGCATTACCA AACTGATTAT TTCCAATATT
GATACACCGA GTCGTGTGTT GGATCTGGGA GCCGGAACAG GATTACTTAC ATATTATTGG
TATAAAGAAT GCCCGTCAGC GGAATATGTA TTAGTTGATA TTGCCGATGA AATGCTGGAA
ATCTCAAGAA AAAGATTTGC GGGGATTGAC AGAATACAGC ATAAAATATT AGATTATTCA
AAGGACCTTC CGGAGGGAAA TTTTGATGCT ATTATATCAG CATTATCAAT TCACCATCTG
GAGGATATGC AAAAAGAAGA ATTGTTCAGG AACATTTACA ATAAGCTGCC GCTAGGTGGA
GTGTTCGTTA ATTATGATCA GTTTTGTGCA GGAACATCTA ATATGAATAA GTGGTTTGAT
TCATATTGGG AAAAGCAATT ATATAACAGC GGATTGACGG ATCGGGATAT CGAACTGTGG
AAAGAACGCA GAAAATTAGA TAAGGAGTGC TCGGTTGAAA CAGAGATTGA GATGTTATAT
AAATGTAATT TTTCAGAGGT GAAATGTTTG TATTCTTATC ATAAATTCTC TGTAATTGCT
GCTATTAAAT AA
 
Protein sequence
MTIEEQFNLI AKEYDCNRRK FIPCFDDYYE SITKLIISNI DTPSRVLDLG AGTGLLTYYW 
YKECPSAEYV LVDIADEMLE ISRKRFAGID RIQHKILDYS KDLPEGNFDA IISALSIHHL
EDMQKEELFR NIYNKLPLGG VFVNYDQFCA GTSNMNKWFD SYWEKQLYNS GLTDRDIELW
KERRKLDKEC SVETEIEMLY KCNFSEVKCL YSYHKFSVIA AIK