Gene Cthe_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1546 
Symbol 
ID4810053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1874604 
End bp1875737 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content48% 
IMG OID640106965 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_001037966 
Protein GI125974056 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAG CAAAGGTTTA TTTTTCGGAT TTTCGCACGG TGCCTTTCGG AGACGGACTG 
CCTACAAAAC TTAAGAAACT CATAAAAAAA GCCGGTATCA GTCAGATAGA TATGGACGGC
AAGTTTGTCG CTATCAAGAT GCATTTTGGT GAGCTGGGAA ATATCAGCTA TCTTCGTCCC
AATTATGCCA GGGCTGTGGT TGACGTTGTA AAGGAGCTGG GCGGCAAGCC TTTTTTGACC
GACTGCAATA CTATGTATCC CGGAAAACGA AAAAATGCCC TTGAGCATTT GGAGTGTGCA
TGGGAAAACG GCTTTACACC GCTGACAGTA GGATGTCCTA TTCTGATCGG GGATGGACTA
AAGGGTACCG ATGATATCGC AGTACCTGTA AAGGGAGGAC AATATGTAAA GGAAGCCAGA
ATCGGGCGGG CCATTATGGA TGCCGACGTG TTCATCAGTC TGACTCATTT CAAGGGGCAT
GAGATGACTG GTTTCGGCGG AGCGATTAAA AACATAGGCA TGGGCTGTGG CTCCCGCGCA
GGGAAAAAGG AACAGCACAG TAATGGCAAG CCGCATATCG ATCAGCATTT GTGCCGGGGC
TGCCGCAGTT GTCTGAAAGA GTGTGCCAAC AACGCTTTAG TATTTGACAC AGTTCACAAA
AAGATGACGG TTGATAAGGA AAATTGCGTG GGCTGTGGTC GTTGCCTTGG TTCGTGTAAT
TTTGATGCTA TTTCATTTGA AGACGATGCT GCCATCGAGC AGTTAAACTG TCGTATGGCG
GAATACGCCA AGGCAGTGGT GGACGGCCGT CCTTGCTTCC ATATTTCCCT GGTGGTGGAT
GTATCCCCTT ACTGCGACTG TCATGGGGAA AATGACGTGC CTATTTTACC AGATTTGGGT
ATGTTTGCGT CCTTTGACCC GGTAGCATTG GATCAAGCGT GTGTAGACGC ATGTCTGAAA
GCTACACCAC TTCCGGGAAG CCGCCTGACC GACAACATGA ATAAACCGGA CTTTGTTGAC
CATCATGACC ACTTCATCAA CACCACGCCC GAATCCGAAT GGCGTTCCTG TTTGGAGCAC
GCGGAGAGAA TCGGTTTGGG TACGCGGGAT TATGAGCTGA TTGTAGTTAA ATAA
 
Protein sequence
MEKAKVYFSD FRTVPFGDGL PTKLKKLIKK AGISQIDMDG KFVAIKMHFG ELGNISYLRP 
NYARAVVDVV KELGGKPFLT DCNTMYPGKR KNALEHLECA WENGFTPLTV GCPILIGDGL
KGTDDIAVPV KGGQYVKEAR IGRAIMDADV FISLTHFKGH EMTGFGGAIK NIGMGCGSRA
GKKEQHSNGK PHIDQHLCRG CRSCLKECAN NALVFDTVHK KMTVDKENCV GCGRCLGSCN
FDAISFEDDA AIEQLNCRMA EYAKAVVDGR PCFHISLVVD VSPYCDCHGE NDVPILPDLG
MFASFDPVAL DQACVDACLK ATPLPGSRLT DNMNKPDFVD HHDHFINTTP ESEWRSCLEH
AERIGLGTRD YELIVVK