| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1539 |
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| Symbol | |
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| ID | 4810046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1864928 |
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| End bp | 1867033 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640106958 |
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| Product | L-glutamine synthetase |
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| Protein accession | YP_001037959 |
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| Protein GI | 125974049 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3968] Uncharacterized protein related to glutamine synthetase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAAAT GTATTGATGA GATCAACTGC GGTATGTTTG GGTCAGCTGT GTTTAGTGAT
GCTGTAATGC AGGAGCGTCT GCCAAAACCT GTTTATAAGA AACTGAAGAA AACAATCAAG
GAAGGTCTTC CGCTTGATCC GGATATAGCT GAGGTTGTGG CCTGTGTGAT GAAGGATTGG
GCGGTTGAAA TGGGTGCAAC CCATTTTACC CACTGGTTCC AACCGTTGAC CGGCGTTACT
GCCGAAAAGC ATGATTCCTT CCTGTCGCCA ACAGGGGACG GCAAGGCCAT CATGGAATTC
TCCGGCAAGG AGCTTATCAA GGGTGAGCCT GATGCTTCGT CCTTCCCATC CGGCGGGCTT
CGTGCAACCT TCGAGGCCAG AGGCTACACC GCATGGGATT GTACCTCGCC TGCATTTGTT
AAGGATAAAA CGCTGTATAT TCCCACAGCT TTCTGCTCCT ATACGGGCGA AGCCCTGGAC
CTGAAAACAC CGCTCTTGCG TTCAATGGAG GCTCTATCCA AGCAAGCGCT TCGTATTCTG
AGGCTCTTTG GCGATACTAC CACAAAGCGG GTTGTAACAA CCTTGGGACC CGAGCAGGAA
TACTTCCTTG TGGACAAGGA AAAGTTCATG CAACGTAAGG ACCTGATCTA CACCGGAAGG
ACCCTGTTTG GTGCAAAGCC GCCCAAGGGA CAGGAGCTTG AGGATCACTA TTTTGGAATT
ATCAAGGAGA AAATCTCCCG CTTCATGCAT GATCTGGATG CCGAGCTCTG GAAGCTTGGA
GTTTCCGCCA AAACCAAACA CAACGAGGTT GCGCCCGCGC AGCACGAGCT GGCTCCGGTG
TTTGCCACGA CCAATATTGC AACCGACCAT AACCAACTGA CCATGGAAAT CATGAAAAAG
GTGGCTGACA GGCACGGGCT TGCATGCCTC TTGCATGAGA AGCCGTTTGC AGGCGTCAAT
GGTTCCGGTA AGCACAATAA CTGGTCCATC TCAACCGACG ATGGCAGGAA CTTGCTCGAT
CCCGGAACAA CGCCGTCGGA AAATGCCCAG TTCCTCATTT TCCTGGTGGC TGTCATCAAG
GCTGTTGATG ATTATGCGGA TCTGTTGCGC TTCTCTGTTG CCACAGCCGG AAATGACCAC
AGACTTGGAG CCAACGAGGC ACCTCCGGCA ATCATGTCCA TTTTCCTTGG CGATGAGCTG
ACCAATGTTA TTGAGGAAAT AGAGACCGGC GTAGTCAAGA ACAACGGAAC CAGCAGAACC
CTGGAAATCG GTGTATCCAC ACTCCCAGTT CTTCCGAAGG ATAACACCGA CAGAAACAGA
ACCTCTCCCT TTGCATTTAC GGGCAATAAG TTTGAGTTCA GGTCCGTGGG TTCCTCACAG
TCCATCGCCA CACCGAACTT TATTATCAAT ACCATTGTGG CTGAAACTCT GAGCCAGATT
GCCGATCGCC TCGAAAAGGC TCAGGATTTC AAAGCAGAAG TGAATGCTGT AGTGAAGGAA
ATCATTAAGA ACCATAAACG TATTATTTTC AATGGCAATA ACTATTCCGA GGAATGGGTT
GCTGAAGCCG AGAGAAGAGG TCTGCCGAAT TTGAAGACCA CTGTCGATGC CATTCCGGTA
CTTCTCGCTG AAAAGAACAT AAAGGTACTT GAAAAGCATG GAGTTTTGAA CCGCGCAGAA
GTGCTTTCAC GTTATGAAAT CTGCCTGGAG AACTATGTCA AGACAATCCG TATAGAGGCC
CTGACCATGA TTGAAATGGC AAGCAGGCAG ATCCTCCCCG CATCACTGGC CTATGTCGGA
AAAGTTGCTG ATACCGTTGC TTCCCTCAAA GCGGCAGGTG CCGATTCCTC CTTTGCCAAG
GAAGAGCTTG ATGAACTTGT ATCACTGACA TCAGGCCTGA AAGCCGCCAT CGACAAACTG
AGTGCGAAGC TTGAAGAGGT CGATGCGCAT GAAGGAGATT CGCTGGAGCA TGCCCGCGCT
TATAAGGATG TCATCATCCC GCTGATGAAC GAATTGCGCG CCTTTGCCGA CAAGCTTGAA
ACCATGGTGG ATGCAAGCTT GTGGCCGATA CCCACCTATG GCGATCTCCT GTTTAGTGTC
ATCTGA
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| Protein sequence | MGKCIDEINC GMFGSAVFSD AVMQERLPKP VYKKLKKTIK EGLPLDPDIA EVVACVMKDW
AVEMGATHFT HWFQPLTGVT AEKHDSFLSP TGDGKAIMEF SGKELIKGEP DASSFPSGGL
RATFEARGYT AWDCTSPAFV KDKTLYIPTA FCSYTGEALD LKTPLLRSME ALSKQALRIL
RLFGDTTTKR VVTTLGPEQE YFLVDKEKFM QRKDLIYTGR TLFGAKPPKG QELEDHYFGI
IKEKISRFMH DLDAELWKLG VSAKTKHNEV APAQHELAPV FATTNIATDH NQLTMEIMKK
VADRHGLACL LHEKPFAGVN GSGKHNNWSI STDDGRNLLD PGTTPSENAQ FLIFLVAVIK
AVDDYADLLR FSVATAGNDH RLGANEAPPA IMSIFLGDEL TNVIEEIETG VVKNNGTSRT
LEIGVSTLPV LPKDNTDRNR TSPFAFTGNK FEFRSVGSSQ SIATPNFIIN TIVAETLSQI
ADRLEKAQDF KAEVNAVVKE IIKNHKRIIF NGNNYSEEWV AEAERRGLPN LKTTVDAIPV
LLAEKNIKVL EKHGVLNRAE VLSRYEICLE NYVKTIRIEA LTMIEMASRQ ILPASLAYVG
KVADTVASLK AAGADSSFAK EELDELVSLT SGLKAAIDKL SAKLEEVDAH EGDSLEHARA
YKDVIIPLMN ELRAFADKLE TMVDASLWPI PTYGDLLFSV I
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