| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1499 |
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| Symbol | |
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| ID | 4810537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1820553 |
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| End bp | 1822307 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640106919 |
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| Product | ammonium transporter |
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| Protein accession | YP_001037920 |
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| Protein GI | 125974010 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease
[COG0347] Nitrogen regulatory protein PII |
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| TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.907074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA CAATGATAGT TGACACCCTT TGGGTAGTAT TTGCAGCCCT ACTTGTATTC
TTTATGAATC TTGGTTTCGC AGCGGTCGAA TCAGGTTTTG CAAGATCAAA AAATACGGTA
AACATCCTGT CAAAGAACTT TATTGTTTTT GCAGTTTCCT CGCTGGGCTT CATGCTGCTT
GGCTGGGGAC TGATGTTCGG CGGAGACAAT CCGATTATCG GCACAAAGGA ACTGTTTATC
CTGGGTGGTT CCGATCTCGG CTTCTACAAA GACACTTTGA CGTCGACCGT ACCCTTCTGG
GGAAAATTCT TCTTCCAGCT TGTTTTCTGT GGTACTGCAG CAACCATTGT ATCCGGTGCA
GTGGCAGAAC GTATAAAATA TATATCCTTT ATAGTATTTT CTTTCATACT GACCCTCTTT
ATTTACCCTG TCGTAGGTCA CTGGATATGG GGCGGCGGCT GGCTGGCCAA CCTTGGTTTT
ATGGACTTTG CCGGCGACAC CGTTGTTCAC TCTGTCGGAG GTTGGGCGGC TCTGACCGGA
GCTATTATAC TTGGACCCCG TCACGGAAAA TATGACAAAG ACGGAAAGCC AAAGGCAATT
CCCGGCCATA GCCTGGCTCT CGCAGTTATC GGTCTTTTCG TCCTGTGGCT TGGATGGTTC
GGCTTCAACC CCGGCTCCAC CATGAGCTTC CAAAATCCGG AGGACGTTGT GCATATCATA
GTAACCACTA ATACAGCCGC CATTGCAGCT ATACTTACCG CCACCGCTAC ATCATGGATC
TTCATTGGCA AACCGGATCT CGGCATGACC ATTAACGGTT GTCTGGCAGG ACTTGTAGGT
ATCACCGGCA GCTGTGCTTA TGTAAGTGTT GGAAGTTCGC TGATCATCGG TGCAATAGCA
GGTATTATCG TTGTATTCTC AGTAATATTC TTTGACCGGA TAAAGGTTGA CGACCCAGTC
GGCGCAACTT CCGTACACCT GGTGTGCGGT GTTTTCGGTA CGCTCTGTGT AGGACTCTTT
GCACAGGAAG GTGTAACCAG CCTTTCCACA GTCAACGGTT TGTTCTTCGG CGGCGGTTTC
TCACTGCTCG GAGCAGAAAT TATCGGCATT ATCGCCGTTG GAGCATTTGT AGTCGCATCA
TCAGCTCTTG TATGGTTCAT TCTTAAGAAA ACAATTGGTA TCCGCGTCAG CCTTGAAGAA
GAAATCCAGG GTCTGGACAT CGGTGAACAC GGAAACTCCG CTTATCCTGA CTTTGCCATC
GTAGCTCCTA TTACGGCTTC AGGCAACGGT AACGGAGACA GCATAGTGGC AATAAGCCAG
GTTGAAACAA TAAAGCCTTC TTCCGTCAAA GTAACTCCGG AAGCTGCAAT CCCAGTGGTC
AATCGTTCCC ATCCCGGAGC AAAGATGACA AAAGTCACCG TTATCACGAA CCAGGACAAA
TATACACAGC TTCAGAACGC TCTCGACAAA ATTGGTATTA CAGGTCTTAC AGTAACAAAT
GTTCTTGGTT ACGGTATGCA GAAAGGACAT ACTGAGTATT TCCGCGGTTT GCCGGTAAAA
ACCAGACTTC TCCCCAAAGT TCAGGTGGAT ATTGTAGTGT GCAAGATACC TGTCGAAACC
GTGGTCGACA CAGTAAAAAA GGCACTGTAT ACGGGCAATA TGGGTGACGG AAAGATCTTC
ATCTATGATG TTGAAAACGT TATAAAAATC AGAACCGGCG AAGAAGGATA CGATGCACTG
CAGGATGAAG AGTAA
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| Protein sequence | MNTTMIVDTL WVVFAALLVF FMNLGFAAVE SGFARSKNTV NILSKNFIVF AVSSLGFMLL
GWGLMFGGDN PIIGTKELFI LGGSDLGFYK DTLTSTVPFW GKFFFQLVFC GTAATIVSGA
VAERIKYISF IVFSFILTLF IYPVVGHWIW GGGWLANLGF MDFAGDTVVH SVGGWAALTG
AIILGPRHGK YDKDGKPKAI PGHSLALAVI GLFVLWLGWF GFNPGSTMSF QNPEDVVHII
VTTNTAAIAA ILTATATSWI FIGKPDLGMT INGCLAGLVG ITGSCAYVSV GSSLIIGAIA
GIIVVFSVIF FDRIKVDDPV GATSVHLVCG VFGTLCVGLF AQEGVTSLST VNGLFFGGGF
SLLGAEIIGI IAVGAFVVAS SALVWFILKK TIGIRVSLEE EIQGLDIGEH GNSAYPDFAI
VAPITASGNG NGDSIVAISQ VETIKPSSVK VTPEAAIPVV NRSHPGAKMT KVTVITNQDK
YTQLQNALDK IGITGLTVTN VLGYGMQKGH TEYFRGLPVK TRLLPKVQVD IVVCKIPVET
VVDTVKKALY TGNMGDGKIF IYDVENVIKI RTGEEGYDAL QDEE
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