Gene Cthe_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1485 
Symbol 
ID4810635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1805567 
End bp1806820 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content42% 
IMG OID640106906 
Productbeta-lactamase-like protein 
Protein accessionYP_001037907 
Protein GI125973997 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000931355 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATG AAATACGAGG AGGATGCAAT ATGAAGAAGC TAAAGATTGC AGATGGAATA 
CACATGCTTA CAATGAATGT TGAAGACATA CTGTTTGAAG GAATATGGGA GCTTGCAAAC
GGAGTCACTC TTAATTCCTA TATAGTTCAG GGAGAAAAAA CTGCAATAAT TGACGGTGTG
ATTGGATGGG ACGGAATACC TGAAACTCTT TATAAAAATT TGGAAGATAT AGGCGTTGAT
CCAAAGAATA TTGATTATTT GATTGTTAAT CATATGGAAC CGGACCATTC AGGCTGGATT
TCAAACTTTA GAAAAATTAA GGATGATTTT ACGGTGATAT GTACCGACAA AGCTGCAAAG
ATGGTAGCAT CCTTCTATGG TGAGGACAAG ATAAGGGTTG TCAAGGAGGG GGATACTCTG
GACCTTGGAA ACGGAAAGGT ACTAAGTTTC CATCCGGTAC CGAACGTTCA CTGGCCGGAC
ACGATGTACA CCTATGAAAG AGAAACAAAA ACCCTCTTCT CATGTGACAT GTTTGGGACA
TTTGGCAGGA TGGGAGAGCA TTGTTTTGAT GACGAGCTGA CACCTGAAGA AGTGGATTTC
TTTGAACTCG AAGGAATGAG ATATTACTCC AATGTAATGG CAACTTTCAC ACCCAGTTTG
AAGAAGGCCA TTGAAAAAGC GAAGGAGCTG GAAATAAATG TTATAGCACC CGGTCACGGC
CCAGTTTATA GAAAAAACCC GCAAAAAATT ATAGATGATT ATTCCAGGTT TGCCCTCTAT
GCAGAAGGAA CGGGCAAAAA TGAAGTTACT ATATTGTGGG GCTCCATGTA TGGAATGACT
GAAAAAGTGG TTAATTACGT TGAAAGCATA CTTCAAAGGG AAGGAATTAA ATATAACAAG
CTGAAAATGC CCCTTGCAAC CGAAAGTGAA ATGGTTGCAA CCGTGTTTAG GTCCGCAGGT
GTGATTATTG GAGCGCCTAC TTATGAGTAC AAGCTTTTCC CGCCGGTTGC ATCGGCTTTG
AATGAGCTTG GCAGAAAGAG GATTACAGGT AAGACGGCAT TCAGATTCGG GTCATACGGA
TGGTCCGGCG GAGCAGAGAA AGAGCTTGCT GAAATAATTG AAAGAAACAA CATGAAATGG
AATTTTATCG AATCCGTGGA GTTTGAAGGA GCACCAAAGG ATGAAGACCT TGCCAGAGTG
GAGGAAAGAG TGTTGGAGTT TATAAAGAAG ATGAGGGAGA AGGTTGCAGA ATAG
 
Protein sequence
MDYEIRGGCN MKKLKIADGI HMLTMNVEDI LFEGIWELAN GVTLNSYIVQ GEKTAIIDGV 
IGWDGIPETL YKNLEDIGVD PKNIDYLIVN HMEPDHSGWI SNFRKIKDDF TVICTDKAAK
MVASFYGEDK IRVVKEGDTL DLGNGKVLSF HPVPNVHWPD TMYTYERETK TLFSCDMFGT
FGRMGEHCFD DELTPEEVDF FELEGMRYYS NVMATFTPSL KKAIEKAKEL EINVIAPGHG
PVYRKNPQKI IDDYSRFALY AEGTGKNEVT ILWGSMYGMT EKVVNYVESI LQREGIKYNK
LKMPLATESE MVATVFRSAG VIIGAPTYEY KLFPPVASAL NELGRKRITG KTAFRFGSYG
WSGGAEKELA EIIERNNMKW NFIESVEFEG APKDEDLARV EERVLEFIKK MREKVAE