Gene Cthe_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1479 
Symbol 
ID4810629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand+ 
Start bp1797508 
End bp1798116 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content42% 
IMG OID640106900 
Producthypothetical protein 
Protein accessionYP_001037901 
Protein GI125973991 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAC GTTCCGTTAT ACCGATGCGA ATAGCAAAAA CAGGCTACAT CGTTATATCG 
GTTGTTCTTC TTTCATTAGG CATATTATTT ATAATCCTGC CGGACATATC GATGCGAACA 
ATCGGAAAAA TGCTCGGAGC AGTCATGGTT TTGTTTGGCT GTATCAAGCT TACAGGCTAT 
TTTTCAAAGG ACTTGTTCCG TTTGGCGTTT CAATATGACC TGCAATTTGG AATACTTGTT 
TTGGTTGTGG GGCTTATTGT TCTTCTCAAG CCATCGGATG CAATCAGCCT GCTGTTTGCG 
GCTATGGGCA TAGCTTTGCT GGCCGACAGT CTTTTCAAAA TTCAGATTGC ATTTGATTCC 
CGAAAGTTCG GCATTAAAAA ATGGTGGGGA ATTCTCGCCC TGGCAATCAT GAGTGCAATT 
GTTACAGCCG TTCTTGTTTT CAAGCCGTCC GAAAGTGCCA GGGTCCTGAC AATCCTTCTT 
GGTGCAACGC TTATCACAGA AGGAATTCTG AATCTGTTTG TGGCGGTTAC AACGGTAAAA 
ATCATAAAAC ATCAATACCC TGACTTTATT GAAGAAGATT ACTTTGAAAC GGAGGGCGAA 
AATAAATGA
 
Protein sequence
MKVRSVIPMR IAKTGYIVIS VVLLSLGILF IILPDISMRT IGKMLGAVMV LFGCIKLTGY 
FSKDLFRLAF QYDLQFGILV LVVGLIVLLK PSDAISLLFA AMGIALLADS LFKIQIAFDS 
RKFGIKKWWG ILALAIMSAI VTAVLVFKPS ESARVLTILL GATLITEGIL NLFVAVTTVK 
IIKHQYPDFI EEDYFETEGE NK