Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1466 |
Symbol | |
ID | 4810616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1784209 |
End bp | 1784754 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640106887 |
Product | hypothetical protein |
Protein accession | YP_001037888 |
Protein GI | 125973978 |
COG category | [S] Function unknown |
COG ID | [COG4283] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000199339 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAAGAC CTGCAACGAA AGAAGATTTA ATTACTGCCG CAAACGAGCA ATTTGACAAG ATGTGGGCAC TTATCGACAG TATGACGGAG GAAGAGCTGG CCATGCCCTT TGATTTTGGT GATGATCCGA AAGACAAGGA GGCTCACTGG AAACGTGATA AAAATCTGCG GGATATTCTC ATTCACCTAT ATGAGTGGCA TCAGCTTTTG TTAAATTGGG TTACTTCCAA CCGGAAGGGT AATTCCGTCC CTTTTTTGCC TGAACCGTAT ACTTGGAAAA CATATGGCGA TCTGAACATG AAATTTTGGG TGAAACATCA ATCCACACCG TATGAAGATG CAAAGAAAAT GCTTTTGCAA AGCCATAAGG AAGTGCTTGC ACTTATCGAG GGGTTTTCCA ACGAGGAGCT GTTTGAAAAA CAGTATTTTA AATGGACAGG AACGACAAGT CTTGGCAGTT ACTGTGTCAG CGCAACAAGC AGCCATTACG ACTGGGCGAT TAAAAAGATA AAACGGCAGA TAAAAAAGCT GCGTTCCCGT TCATGA
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Protein sequence | MPRPATKEDL ITAANEQFDK MWALIDSMTE EELAMPFDFG DDPKDKEAHW KRDKNLRDIL IHLYEWHQLL LNWVTSNRKG NSVPFLPEPY TWKTYGDLNM KFWVKHQSTP YEDAKKMLLQ SHKEVLALIE GFSNEELFEK QYFKWTGTTS LGSYCVSATS SHYDWAIKKI KRQIKKLRSR S
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