Gene Cthe_1466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1466 
Symbol 
ID4810616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1784209 
End bp1784754 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content43% 
IMG OID640106887 
Producthypothetical protein 
Protein accessionYP_001037888 
Protein GI125973978 
COG category[S] Function unknown 
COG ID[COG4283] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000199339 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAGAC CTGCAACGAA AGAAGATTTA ATTACTGCCG CAAACGAGCA ATTTGACAAG 
ATGTGGGCAC TTATCGACAG TATGACGGAG GAAGAGCTGG CCATGCCCTT TGATTTTGGT
GATGATCCGA AAGACAAGGA GGCTCACTGG AAACGTGATA AAAATCTGCG GGATATTCTC
ATTCACCTAT ATGAGTGGCA TCAGCTTTTG TTAAATTGGG TTACTTCCAA CCGGAAGGGT
AATTCCGTCC CTTTTTTGCC TGAACCGTAT ACTTGGAAAA CATATGGCGA TCTGAACATG
AAATTTTGGG TGAAACATCA ATCCACACCG TATGAAGATG CAAAGAAAAT GCTTTTGCAA
AGCCATAAGG AAGTGCTTGC ACTTATCGAG GGGTTTTCCA ACGAGGAGCT GTTTGAAAAA
CAGTATTTTA AATGGACAGG AACGACAAGT CTTGGCAGTT ACTGTGTCAG CGCAACAAGC
AGCCATTACG ACTGGGCGAT TAAAAAGATA AAACGGCAGA TAAAAAAGCT GCGTTCCCGT
TCATGA
 
Protein sequence
MPRPATKEDL ITAANEQFDK MWALIDSMTE EELAMPFDFG DDPKDKEAHW KRDKNLRDIL 
IHLYEWHQLL LNWVTSNRKG NSVPFLPEPY TWKTYGDLNM KFWVKHQSTP YEDAKKMLLQ
SHKEVLALIE GFSNEELFEK QYFKWTGTTS LGSYCVSATS SHYDWAIKKI KRQIKKLRSR
S