| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1457 |
|---|
| Symbol | |
|---|
| ID | 4810607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1776662 |
|---|
| End bp | 1777324 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640106878 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001037879 |
|---|
| Protein GI | 125973969 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000137029 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGAGG TTCTTGTAAT TGTCGGTCGA CTGTCCGAGA GTTTTATACT CAACTGCAAA
CTTTTTATAT TAACGCTTTT GTTTGCACTG CCTTTGGGGA TGATAATTGC TTTTGGTTCG
ATGAGCCGTT TTTATCCTCT TCGGTGGTTG GTGCGGACTT TTGTCTGGGT AATCCGGGGA
ACGCCCCTGA TGCTGCAGCT TATAATAATT TTTTTTGGCC CGGGTCTTTT AAATATGCCT
TTTTCCTGGC CGAGCGGTGA ATCAGGACGT TTTGTTGCAG CAACCGTTGC TTTTGTTATC
AACTATGCCT GTTATTTTTC GGAGATCTAC CGGGGCGGTA TTGAAAGCAT TCCGGTAGGG
CAATATGAAG CGGGACAGGT TTTGGGAATG ACAAAGACAC AGATTTTCTT CCATGTAACC
CTGCTCCAAG TAATAAAACG TATTGTTCCT CCAATTGGCA ATGAAGTGAT TACCCTGGTG
AAGGATACAT CTCTTGCCCG CATCATTGCA AATAAGGAGA TTATTATGAT GGCCGGAGAG
TACAGCAATA AAGGGCTTAT TTGGCCTCTT TTTGCCACAG GCATATATTT CCTTGTTTTT
GTCGGGGGTT TGACCATCCT GCTTAATTGG GTGGAAAAGA AACTTGGTTA TTTCCGTGTT
TGA
|
|---|
| Protein sequence | MNEVLVIVGR LSESFILNCK LFILTLLFAL PLGMIIAFGS MSRFYPLRWL VRTFVWVIRG
TPLMLQLIII FFGPGLLNMP FSWPSGESGR FVAATVAFVI NYACYFSEIY RGGIESIPVG
QYEAGQVLGM TKTQIFFHVT LLQVIKRIVP PIGNEVITLV KDTSLARIIA NKEIIMMAGE
YSNKGLIWPL FATGIYFLVF VGGLTILLNW VEKKLGYFRV
|
|---|
| |