| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1456 |
|---|
| Symbol | |
|---|
| ID | 4810606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1775862 |
|---|
| End bp | 1776647 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640106877 |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_001037878 |
|---|
| Protein GI | 125973968 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000193058 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTT TAGAAGTAAA GGGTATTGAA AAAAGTTTTG GAACCGTCAA GGTTTTGAAA
AAGATTGATT TTTCATTGGA AAAAGGAGAG GTAATTGCGA TTATAGGTCC TTCCGGAAGC
GGAAAGACTA CATTGCTGCG TTGCCTTAAT TTCCTGGAGC GGCCCGATAA AGGAAGTATC
ATCGTAAATA ATGAGGTAAT TTTTGATGCA ATGGACCCTT CCACTCAACG GGAAAGCGAA
GTGCGCAAAA AACGGCTGCA TTTCGGCCTG GTTTTTCAAA ATTTTAATCT TTTTCCCCAG
TATACGGTTC TGAAAAACGT TACATTGGCG GCTGAGCTGC TGGCAAAAGA ACGCCCGGAC
TATAAGCAGA ATAAAAAAGC TATTTTGAAA GAGATTCAGG ACCGGGGCAA AATGCTTTTG
TCCCAGGTTG GCCTGTCGGA TAAGTTGGAT TGCTATCCCC ATATGATATC CGGCGGACAG
CAGCAGCGCG TAGCTATTGC CCGCGCCCTG GCTTTGGACC CGGACATTCT GTGTTTTGAC
GAACCGACAT CTGCCTTAGA CCCTGAGCTT ACCGGGGAAG TGCTGAAAGT TATCAAGGGT
TTGGCGGAAC GCAACACCAC AATGATTATT GTGACCCATG AAATGGATTT TGCCAGAGAT
GTGGCAAACC GTGTTATTTT TATGGATGCC GGCGTGATTG TCGAACAGGG TTCTCCGCAG
GAAGTGTTTG GGAATCCTAA AGAAGAGAGA ACCAGGCAGT TTTTGGCGCG GTATAAGAAA
CATTAA
|
|---|
| Protein sequence | MAFLEVKGIE KSFGTVKVLK KIDFSLEKGE VIAIIGPSGS GKTTLLRCLN FLERPDKGSI
IVNNEVIFDA MDPSTQRESE VRKKRLHFGL VFQNFNLFPQ YTVLKNVTLA AELLAKERPD
YKQNKKAILK EIQDRGKMLL SQVGLSDKLD CYPHMISGGQ QQRVAIARAL ALDPDILCFD
EPTSALDPEL TGEVLKVIKG LAERNTTMII VTHEMDFARD VANRVIFMDA GVIVEQGSPQ
EVFGNPKEER TRQFLARYKK H
|
|---|
| |