| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1427 |
|---|
| Symbol | |
|---|
| ID | 4810577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | + |
|---|
| Start bp | 1747812 |
|---|
| End bp | 1748114 |
|---|
| Gene Length | 303 bp |
|---|
| Protein Length | 100 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640106850 |
|---|
| Product | branched-chain amino acid transport |
|---|
| Protein accession | YP_001037851 |
|---|
| Protein GI | 125973941 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4392] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0169671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTATG CACTCATTGC CGCTTTGTTA ATGGCGCTTG TTACATATTT GCCCAGGGTA
CTTCCCATTG CCGTCTTTAG AAAAGAAATC AAATCAACTT ATATAAAATC TTTTTTACGG
TATGTCCCTT ATGCAGTATT GGGAGCACTT ACGTTTCCGG ACATTTTTAG TTCCACCAAC
AATTACGGCA CTGCCATCTG CGGCACTGTT GTCGCTTTAA TTCTGGCTTA TATGGAAAAA
AGCCTTTTTA TAGTGGCATT GGGAGCAATA TTGACCGTAT ATGTCACCGG ATTGTTTCTA
TAG
|
|---|
| Protein sequence | MPYALIAALL MALVTYLPRV LPIAVFRKEI KSTYIKSFLR YVPYAVLGAL TFPDIFSSTN
NYGTAICGTV VALILAYMEK SLFIVALGAI LTVYVTGLFL
|
|---|
| |