| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1421 |
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| Symbol | |
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| ID | 4809082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | + |
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| Start bp | 1740053 |
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| End bp | 1741033 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640106844 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001037845 |
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| Protein GI | 125973935 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000360798 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA AACAGCTAAT CGGTTTAATT GTGGCAGGAG TAGTATTTGT TTTTGTTTGT
TCTTCAAGTG TTTTGGTAAA CACCGTTTCA AAAAGACTCG GAACGTCTCT GAACTTAAGC
GACAGCGAAA GCAGTCTTCC TCTTACTCCC TATATAGGTG TTGTAAGTGT TGAAGGCACC
ATTATGGACA GCAACTCAAC CACAAGTTTC TTAAGCAACG GTTACAACCA CAAAGAAACG
TTGAAGCTCA TTGAGGATAT GAAAAATTCA GCAAGCAACA AAGGCATTCT TTTGTATGTG
AATTCCCCCG GCGGAGGCGT TTATGAAAGT GATGAATTGT ATTTGAAGTT GAAAGAATAC
AAAGAAGAAA CCGGAAGGCC GGTCTGGACC TATATGTCAA ATCAGGCATG TTCCGGTGGC
TATTATATTT CTATGGCATC CGACAAAGTA TTTTCAAACC GAAACGCATG GACCGGTTCC
ATCGGCGTCA TCATCTCCCT GACAAACCTC AAAGGCTTGT ACGATAACCT TGGAATTAAA
GGTATTTATA TTACAAGCGG CAGAAACAAA GCAATGGGTG CTGCCGATCT GGAATTGACA
GATGAGCAGC GTGATATACT TCAAAGCCTT GTGGATGAGG CATATGAGCA ATTTGTTGAA
ATTGTGGCGG AAGGCAGAAA AATGACAGTG GAAGAAGTAA AAAGAATTGC CGATGGAAGA
ATTCTTTCCG CAAAACAGGC ACTCGAGTTG AACCTCATTG ATGAAATTGC CACGTATGAT
GAAGTAAAAG AAGCTTTCAG CGCAGAGCTT GGAAATGTTA AAATATATAC ACCCAAAAAG
AAAGACCCGT TTGGACTTAG CTCTTTGTTC AGCTATATAA ACAGCTTGAA ACCTCGCTCT
GATACTGAAA TAATAGCCGA GTTGATAAAG GCTAAAGGAA ATGGGGTGCC GATGTATTAT
GCAATGCCGG GACAATACTA A
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| Protein sequence | MNKKQLIGLI VAGVVFVFVC SSSVLVNTVS KRLGTSLNLS DSESSLPLTP YIGVVSVEGT
IMDSNSTTSF LSNGYNHKET LKLIEDMKNS ASNKGILLYV NSPGGGVYES DELYLKLKEY
KEETGRPVWT YMSNQACSGG YYISMASDKV FSNRNAWTGS IGVIISLTNL KGLYDNLGIK
GIYITSGRNK AMGAADLELT DEQRDILQSL VDEAYEQFVE IVAEGRKMTV EEVKRIADGR
ILSAKQALEL NLIDEIATYD EVKEAFSAEL GNVKIYTPKK KDPFGLSSLF SYINSLKPRS
DTEIIAELIK AKGNGVPMYY AMPGQY
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