Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1415 |
Symbol | |
ID | 4809076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1735397 |
End bp | 1736257 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640106838 |
Product | ABC transporter related protein |
Protein accession | YP_001037839 |
Protein GI | 125973929 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTTA AGCTTGAAAA TATAACCAAG TTTTATGGAA AACAGTGCGC ATTGGATAAT TTTAATGGTG TTTTTACGGA AGGCATATAT GGATTGCTGG GACCCAACGG GGCGGGAAAA ACTACGCTGA TAAATATAAT TATTGGGGTT TTGGAGGCCA GTAAAGGAGC AATTTTACTG GATGGGTCTG ACGTAAAAAA AATGGGCACA AAATATCTGG ATAAAGTTGG ATATTTACCT CAGGAACCGA CTTTTTATAA AAATTTCCGA GTGGATGAGT TTTTGAAATA TATGTGCGCA ATTAAGGGTA TCCCGTCAAA ACATGTAGAT AGCAGGATAG AAGAGGTGCT GGAATTAGTA AATCTTACCG ACTCATATAA GAAAAAAGTA GGTGCTTTGT CAGGAGGAAT GAGACAAAGA CTGGGAATTG GACAAGCAAT TCTTAACAGA CCGGATATCC TGATTTTGGA TGAACCGACT GCAGGCTTGG ATCCCGGTGA GAGAATACGT TTTCGAAATA TTATTTCAAA GCTTTCCAAA GACAGGATTG TGCTTTTGGC CACACACATT GTTTCAGATG TTGAATATAT TGCAAAAGAA GTATTAATTC TGAAAAAAGG TAAGTTAGTG AAAAAAGGTA CTACAAAAGA ATTAGAAAGA ACTGTGGAAG GCAAAATATG GAATGTGACT GTGTCAGAGA CAGATGTAGA AAAATATATG CATAAGTATT TGATTGCAAA TATCAAACGA TTGGAAGACA AATTACAACT GCGCATTGTT TCCGAAAGCA GGCCGGATGG GATTGCCGAA GCTGTGGCAC CTTCTTTGGA AGATGTTTTT TTATCGATAA TGGAACAATA A
|
Protein sequence | MELKLENITK FYGKQCALDN FNGVFTEGIY GLLGPNGAGK TTLINIIIGV LEASKGAILL DGSDVKKMGT KYLDKVGYLP QEPTFYKNFR VDEFLKYMCA IKGIPSKHVD SRIEEVLELV NLTDSYKKKV GALSGGMRQR LGIGQAILNR PDILILDEPT AGLDPGERIR FRNIISKLSK DRIVLLATHI VSDVEYIAKE VLILKKGKLV KKGTTKELER TVEGKIWNVT VSETDVEKYM HKYLIANIKR LEDKLQLRIV SESRPDGIAE AVAPSLEDVF LSIMEQ
|
| |