Gene Cthe_1415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1415 
Symbol 
ID4809076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1735397 
End bp1736257 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content37% 
IMG OID640106838 
ProductABC transporter related protein 
Protein accessionYP_001037839 
Protein GI125973929 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTTA AGCTTGAAAA TATAACCAAG TTTTATGGAA AACAGTGCGC ATTGGATAAT 
TTTAATGGTG TTTTTACGGA AGGCATATAT GGATTGCTGG GACCCAACGG GGCGGGAAAA
ACTACGCTGA TAAATATAAT TATTGGGGTT TTGGAGGCCA GTAAAGGAGC AATTTTACTG
GATGGGTCTG ACGTAAAAAA AATGGGCACA AAATATCTGG ATAAAGTTGG ATATTTACCT
CAGGAACCGA CTTTTTATAA AAATTTCCGA GTGGATGAGT TTTTGAAATA TATGTGCGCA
ATTAAGGGTA TCCCGTCAAA ACATGTAGAT AGCAGGATAG AAGAGGTGCT GGAATTAGTA
AATCTTACCG ACTCATATAA GAAAAAAGTA GGTGCTTTGT CAGGAGGAAT GAGACAAAGA
CTGGGAATTG GACAAGCAAT TCTTAACAGA CCGGATATCC TGATTTTGGA TGAACCGACT
GCAGGCTTGG ATCCCGGTGA GAGAATACGT TTTCGAAATA TTATTTCAAA GCTTTCCAAA
GACAGGATTG TGCTTTTGGC CACACACATT GTTTCAGATG TTGAATATAT TGCAAAAGAA
GTATTAATTC TGAAAAAAGG TAAGTTAGTG AAAAAAGGTA CTACAAAAGA ATTAGAAAGA
ACTGTGGAAG GCAAAATATG GAATGTGACT GTGTCAGAGA CAGATGTAGA AAAATATATG
CATAAGTATT TGATTGCAAA TATCAAACGA TTGGAAGACA AATTACAACT GCGCATTGTT
TCCGAAAGCA GGCCGGATGG GATTGCCGAA GCTGTGGCAC CTTCTTTGGA AGATGTTTTT
TTATCGATAA TGGAACAATA A
 
Protein sequence
MELKLENITK FYGKQCALDN FNGVFTEGIY GLLGPNGAGK TTLINIIIGV LEASKGAILL 
DGSDVKKMGT KYLDKVGYLP QEPTFYKNFR VDEFLKYMCA IKGIPSKHVD SRIEEVLELV
NLTDSYKKKV GALSGGMRQR LGIGQAILNR PDILILDEPT AGLDPGERIR FRNIISKLSK
DRIVLLATHI VSDVEYIAKE VLILKKGKLV KKGTTKELER TVEGKIWNVT VSETDVEKYM
HKYLIANIKR LEDKLQLRIV SESRPDGIAE AVAPSLEDVF LSIMEQ