| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1412 |
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| Symbol | |
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| ID | 4809073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1730642 |
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| End bp | 1731826 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640106835 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_001037836 |
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| Protein GI | 125973926 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00140909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAAAG GAAGATTTGG AATCCACGGC GGACAATACA TTCCGGAAAC ATTGATGAAC
GCCGTGATTG AGCTGGAAGA GGCATATAAC CACTTTAAAA ACGACCCCGA CTTTTTGGCG
GAACTTGACG ACCTGTTGAA AAATTATGCA GGACGTCCGT CTTTGCTTTA TTATGCGGAA
AAGATGACAA AAGACCTGAA CGGAGCAAAA ATTTATCTGA AACGTGAGGA TCTCAACCAT
ACAGGTTCGC ATAAAATAAA CAATGTTTTG GGCCAGGTGC TTCTTGCAAA ACGTATGGGT
AAAAAACGCG TAATTGCCGA GACCGGCGCC GGACAGCATG GTGTTGCGAC GGCAACCGCT
GCGGCGCTTA TGGGATTGGA ATGTGAAATT TTCATGGGCA AGGAGGATAC CGAGCGTCAG
GCGTTGAATG TATTTAGGAT GGAGCTTTTG GGCGCGAAAG TTCATGCGGT GACAAGCGGA
ACACAGACAC TTAAAGATGC GGTAAATGAG ACTTTGAGAG AGTGGTCGAG AAGGGTTCAT
GACACTCATT ATGTGCTGGG TTCTGTCATG GGACCACACC CGTTTCCTAC CATTGTAAGG
GATTTTCAGA GCGTAATCGG CCGGGAAATT AAAAAGCAGA TTATGGAGAA GGAAGGAAAA
CTTCCTGACG TTGTTATGGC CTGTGTGGGC GGAGGCAGCA ATGCAATCGG AGCGTTTTAT
GAGTTTATTG GTGATTCAAG TGTTCGGCTT ATAGGATGTG AGGCTGCCGG AAAGGGATTG
GACACTGACA AGCATGCGGC AACAATGTCA AAAGGTACAT TGGGAATTTT CCACGGCATG
AAGTCTTATT TCTGCCAGGA TGAGTATGGA CAGATTGCAC CGGTTTATTC TATTTCCGCA
GGTCTGGACT ACCCAGGAGT GGGCCCGGAA CATGCGTATC TGAAGGATAT TGGAAGGGCT
CAATACGTAG CCGTTACCGA TGATGAGGCC GTTGAGGCGT TTGAATACCT TTCCCGAACA
GAAGGTATAA TTCCGGCAAT TGAGAGTTCC CATGCGGTTG CATATGCAAT GAAACTTGCT
CCGACGATGA GCAAAGATCA GATAATTGTA ATTTGCCTTT CGGGAAGAGG CGATAAAGAT
GTTGCGGCGA TAGCGCGTTA CAGGGGGGTT CAAATCTATG AATAA
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| Protein sequence | MSKGRFGIHG GQYIPETLMN AVIELEEAYN HFKNDPDFLA ELDDLLKNYA GRPSLLYYAE
KMTKDLNGAK IYLKREDLNH TGSHKINNVL GQVLLAKRMG KKRVIAETGA GQHGVATATA
AALMGLECEI FMGKEDTERQ ALNVFRMELL GAKVHAVTSG TQTLKDAVNE TLREWSRRVH
DTHYVLGSVM GPHPFPTIVR DFQSVIGREI KKQIMEKEGK LPDVVMACVG GGSNAIGAFY
EFIGDSSVRL IGCEAAGKGL DTDKHAATMS KGTLGIFHGM KSYFCQDEYG QIAPVYSISA
GLDYPGVGPE HAYLKDIGRA QYVAVTDDEA VEAFEYLSRT EGIIPAIESS HAVAYAMKLA
PTMSKDQIIV ICLSGRGDKD VAAIARYRGV QIYE
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