Gene Cthe_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1406 
Symbol 
ID4809067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1725011 
End bp1725697 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID640106829 
Producthypothetical protein 
Protein accessionYP_001037830 
Protein GI125973920 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATC AGATAAACTT CAATGATATT TTCAAATCAA GCTTTTTGGA GAAGGTGTCG 
AGTGTTTCGC TGTTGGATGC TGCTATTGCT TTTGGATTGG CGTTTTGTAT CGGCCTGTTC 
ATATATTTTG TGTACAAGAA AACTTATAAA GGAGTCATGT ATTCAAGAAC CTTCAGCATT 
TCACTGATAG CTCTCACAAT GATAACCACC CTGATGATAC TTGCAGTGAC TTCCAATGTG 
GTGCTGTCCC TCGGTATGGT TGGTGCTCTG TCGATTGTAA GATTCCGTTC AGCTATAAAG 
GACCCTATGG ACATTGCATA TCTTTTCTGG TCAATAGCAG TTGGTATAGT ATTGGGAGCA 
GGGCTCATAC CTTTGGCTGT GTTCGGTTCA CTCTTTATAG GAATAATACT GGTATTGTTT 
GTAAACAGGA ACAGTATCGA CAATCCTTAT ATTTTGGTGG TAAACTGCGA AGATGACAAG 
GCAGAAAGCA ATGTGATGAA TATAATCAAA GATAAAGTAA GGAAATATGT TGTAAAGTCA 
AAGACCATAA CGGGAGGAAA AGGAATAGAG GTTGCGGTTG AAGTACGCCT AAAAAGCATG 
GAAACGGAAT TTGTAAATGA GATAAGCAGA CAAAATGGGG TTTTAAGTGC TGTTATGGTA 
AGCTATAACG GAGATTATAT GAGTTAA
 
Protein sequence
MRNQINFNDI FKSSFLEKVS SVSLLDAAIA FGLAFCIGLF IYFVYKKTYK GVMYSRTFSI 
SLIALTMITT LMILAVTSNV VLSLGMVGAL SIVRFRSAIK DPMDIAYLFW SIAVGIVLGA 
GLIPLAVFGS LFIGIILVLF VNRNSIDNPY ILVVNCEDDK AESNVMNIIK DKVRKYVVKS 
KTITGGKGIE VAVEVRLKSM ETEFVNEISR QNGVLSAVMV SYNGDYMS