Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1402 |
Symbol | |
ID | 4809063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1719700 |
End bp | 1720179 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640106825 |
Product | DtxR family iron dependent repressor |
Protein accession | YP_001037826 |
Protein GI | 125973916 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000267968 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA GCGAATTTCA CACGGTCAGA GGATATCAGC TTATCGAACA GGAGAAAAAA CTTCTGACAT CTGCCATGGA GGATTATCTT GAAATGATTT TCAGAAATAT AAAAAAGGAA GGATATATGC GCATCAATAC GTTGGCGGAG ATGTTGAATG TAAGGCCTTC ATCGGCAACT AAAATGGTTC AAAAACTTTC TGAAAAAGGA TTTGTAGAGT ATAAGAGGTA TGGTATTATT ACTCTTACAG AAAAAGGAAA AGCACTGGGC GAGTTTCTTC TGAAAAGGCA CAATATAATT GAAAAATTTT TAAGAAGTAT CGGAATCAGT GACAACCTTT TGATAGAAAC GGAGCTTATT GAACATAATC TCAGTGTTGA CACTTTAAGA AGTATTGATG AGCTGAACAG CTTTTTTGAA GAGTATCCTG AAATTTTGGA AAAATTCCGG CGATATAAAA ATAAAAAAGC AAAGAAATAA
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Protein sequence | MENSEFHTVR GYQLIEQEKK LLTSAMEDYL EMIFRNIKKE GYMRINTLAE MLNVRPSSAT KMVQKLSEKG FVEYKRYGII TLTEKGKALG EFLLKRHNII EKFLRSIGIS DNLLIETELI EHNLSVDTLR SIDELNSFFE EYPEILEKFR RYKNKKAKK
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