| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1399 |
|---|
| Symbol | |
|---|
| ID | 4809060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1710415 |
|---|
| End bp | 1710933 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640106822 |
|---|
| Product | C_GCAxxG_C_C family protein |
|---|
| Protein accession | YP_001037823 |
|---|
| Protein GI | 125973913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01909] C_GCAxxG_C_C family probable redox protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0718926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTTATGCT CATTGGTATA TAATAGTAGT ATGGAGCAAT TAGAGGACAG GGGTCAAAAC
GGAGGGATAT TTTTGAACGG TAAATCCGAA CGGGCTGTTG AGTTGTTTAA GGAAGGATAC
AATTGTTCCC AGGCGGTTCT TGCGGCATAT TGCGAAGATG TTGGAATTGA CATGAAAACT
GCATTAATGA TTGCTTCTCC CTTTGGAGGC GGTATCGGAA GACTCAGAGA GGTTTGCGGA
GCTGCCTCGG CCATGTTTAT GATTGCCGGA TTAAAGTACG GGTATGTGGA CCCGAAGGAC
ATGAATGCAA AAAAGGAGCA TTATGAGTTG GTCCAAAAAC TTGTGGAAAG GTTTAAGGAA
GAGAACGGTT CTATAATATG CAGAGAGCTT TTGGGACTCA ATGTGGTTCA TGACAAACCT
GAACCTGAGA AAAGGACGGA GGGTTATTAT AAAAAGCGGC CATGTGCGGA AATAGTAAGA
AGTGCGGCTG AAATTGTTGA TGAGTTGTTA AAAACGTAA
|
|---|
| Protein sequence | MLCSLVYNSS MEQLEDRGQN GGIFLNGKSE RAVELFKEGY NCSQAVLAAY CEDVGIDMKT
ALMIASPFGG GIGRLREVCG AASAMFMIAG LKYGYVDPKD MNAKKEHYEL VQKLVERFKE
ENGSIICREL LGLNVVHDKP EPEKRTEGYY KKRPCAEIVR SAAEIVDELL KT
|
|---|
| |