| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1393 |
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| Symbol | |
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| ID | 4809054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1702079 |
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| End bp | 1703848 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640106817 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001037818 |
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| Protein GI | 125973908 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000411549 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AAATTTTTAA ATATTATTTG CTTTTGATTC TTATAATCCT ATCTGTGACA
GTCATATTTA TCCCAAAGGT CTCAAGAAAG TTCTACACTC AAGAGGTGGA AAACAAACTT
GAGGGAATAG CTTTTTCAAT TGAGTACTAT TTGTTGAATG AAGCAAAGAA CGGCGAAATT
GATTTTGACT TTATCGCAAA GGATTATGCC GCAAAGTACA ACCAAAATTC CACCTTTCAG
GGTGAGAGTC TAAGAATTAC CTTTATCAGT TATGACGGAA AAGTGTTGGG TGATTCGGAT
GCAAATTTTA ATCAAATGGA AAATCACTTG AGCAGAAAAG AGATTCAGGA TGCACTCAAA
GGGAATGTCG GTAAAGACAT CCGCAGCAGT AAGACTTTGA AGTTGGATTT GCTTTATATG
GCAATTCCTG TGGAGGAATT GAATGTAATT GCCAGAGTTT CTGTTCCCCT TGTTCAAATA
AAAAAAATTA ACAGATTGAT TTGGCTCTAT TCAATTTTAA TTTTTATTAT GGCACTTATA
ATAACGGTAA TTGTGTCTTT GAGGATAGCA GGACTTGTAA TTCGTCCGTT GAATGATATT
ATTTCGGTAT CAAAGGAAAT AACCAACGGC AACTATTCCA GGAGAATCAA GTTAAAATCA
AAAGATGAGC TGGGACAGCT TGCCGTCCAT TTTAACAAAA TGGCTTCAAA GCTTGAAAGA
ACCATATCTG ATTTGAATAC AAAGAAAATT GAGCTTGAAT CTATTGTGGA GAGTATAACA
AACGGAATTG TTGCAGTGGA CGGCAATAAC AAGGTTATAC TGATAAATCC TGCTGCTTTC
ACTGTTTTTA ATTTGGATGC CGATGCCGAA ATTTTGGGAG ATGATATTGA AAACCATATT
AAAAACAGTC AGATAAATTC TCTTTTAAAA GATGCAATAC AGAAAAATAA GCCGTTGGAG
GCTGAAGTTG CAATTGACGG CCGGGTGCTT TTGGTAAACG CTTCACCTAT AAGACCCAAA
GACAGCGATA TTGATAATTC GGGAGGAATT GTATTTATTC AGGACATAAC AAAGGTAAGA
AAGCTGGAGC AGATTCGAAC TGAATTTGTT TCCAATGTCA CCCATGAACT AAAAACACCG
ATAACACCGA TCCGAGGATT CATTGAGACA TTGAAAAACG GTGCTATGAA TAATCCTGTT
GTGGCGGAAA GATTTTTGGA AATCATTGAT ATCGAAGCTG AGCGTCTTCA CGAATTGATT
AACGACATTT TGCTGCTGTC GGAAATTGAG ACAAAGTTAA AAGATACCAA CTTGGAAATC
TTCGATTTAA AATCCATGGT GGATGATGTT TTTAAAGTTA TGCAAAACAT TGCAAAGGAG
AAGAAGATCA GCCTGAACAA CAATGTGCGG GATGAAGTGT TGATGAAAGC AAACATAAAC
CGCATGAAAC AGTTGATAAT GAATTTAGTG GACAACGGAA TAAAATATAA TGTTCAAAAC
GGCTCGGTAT CGGTTGACGG GTACAGGGAG GACGGAAAGG TTGTCATTTC CGTAAAAGAT
ACGGGAATAG GAATTCCTTC GGCCCATATA CCGAGAATTT TTGAGCGCTT TTACAGGGTG
GACAAGGGAA GGTCAAGGGG AATGGGAGGT ACCGGTCTGG GTCTTTCAAT AGTAAAGCAC
ATTGTAAACC TTTATAACGG AGAAATAAAG GTAAATTCTG TTGTGGGGGA AGGCACCGAA
TTTATTGTAA AAATTCCGTG CCAACCGTAA
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| Protein sequence | MKKKIFKYYL LLILIILSVT VIFIPKVSRK FYTQEVENKL EGIAFSIEYY LLNEAKNGEI
DFDFIAKDYA AKYNQNSTFQ GESLRITFIS YDGKVLGDSD ANFNQMENHL SRKEIQDALK
GNVGKDIRSS KTLKLDLLYM AIPVEELNVI ARVSVPLVQI KKINRLIWLY SILIFIMALI
ITVIVSLRIA GLVIRPLNDI ISVSKEITNG NYSRRIKLKS KDELGQLAVH FNKMASKLER
TISDLNTKKI ELESIVESIT NGIVAVDGNN KVILINPAAF TVFNLDADAE ILGDDIENHI
KNSQINSLLK DAIQKNKPLE AEVAIDGRVL LVNASPIRPK DSDIDNSGGI VFIQDITKVR
KLEQIRTEFV SNVTHELKTP ITPIRGFIET LKNGAMNNPV VAERFLEIID IEAERLHELI
NDILLLSEIE TKLKDTNLEI FDLKSMVDDV FKVMQNIAKE KKISLNNNVR DEVLMKANIN
RMKQLIMNLV DNGIKYNVQN GSVSVDGYRE DGKVVISVKD TGIGIPSAHI PRIFERFYRV
DKGRSRGMGG TGLGLSIVKH IVNLYNGEIK VNSVVGEGTE FIVKIPCQP
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