Gene Cthe_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1381 
Symbol 
ID4809376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1685147 
End bp1686646 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content40% 
IMG OID640106805 
Productthreonine synthase 
Protein accessionYP_001037806 
Protein GI125973896 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTATG AAAGTACACG AGGGGGATTA AAATCTGTAT CATCTGCTGA AGCTATAAAA 
AGGGGTATAG CGCCGGACGG TGGATTGTTT GTCCCGGAGA ATAAAGTAAG TTTTACCGGT
AGTGAAATTA GCGCCATGGC TGATATGAGT TATCAGGAAA GGGCGTTATA TATATTAAAG
CACTATCTTA CGGATTATAG CGATGAAGAA ATAGCGGACT GTGTTTACAA TGCCTATACC
GATGAAAAGT TCGACGACAA AAGAATTGCT CCCTTGGTTC AGCTGAATGA AAATGTCAAT
ATCCTGGAAT TGTGGCACGG ACCAACATGT GCATTCAAAG ACATGGCACT TCAAATATTG
CCTCATTTCC TTGTAAAGGC AGTGAGAAAA ACCGGCGAAA CCGGTGAAAT CGTAATTTTG
GTTGCAACTT CAGGAGATAC CGGAAAAGCT GCTTTGGAAG GTTTTAAGGA TGTTGAGGGC
ACAAGAATAA TTGTGTTCTA TCCCCAGGAT GGCGTAAGCC AGGTTCAGAA AATGCAAATG
GTCACCCAGG AAGGAAAAAA TGTTTACACC ATAGGAGTGG AAGGAAATTT TGACGACGCA
CAAAGCGGAG TAAAAGCAAT TTTTACCGAT GAAGAACTTA AGCAGAAAAT GGACAAAGGC
AATTTCAAAT TTTCATCGGC GAATTCCATT AACTGGGGGA GACTTGTACC TCAGATAGTC
TATTATTTTT CGGCATATGC TGATATGCTG AAGAACGGTG AAATAAAAGA GGGAGACAAG
ATTAACTTTG TTGTCCCCAC AGGAAATTTC GGAAATATTC TTGCGGCTTT CTATGCAATG
CAAATGGGGC TTCCTGTAAA CAGGCTCATT TGTGCGTCCA ATGACAATAA TGTTTTAACC
GATTTTATCA ATACAGGAGT ATATGACAAA AACAGGGAGT TTAAGAGGAC CATTTCGCCG
TCTATGGACA TATTGATTTC AAGCAACCTT GAAAGACTCC TCTTTGAACT TACCGGACAT
GATCCTTTGC CGGTGAACAA TTGGATGAGC AGTTTGAAAG AAACCGGAAA ATATACTGTT
GACAATACAA TGAAGAAAAA GATATCGGAA ATATTCTGGG GCGGATATTC AAACGAGGCT
GAAACTTTAA AGACGATAGA GGCTATATAC AAGGAATACG GATATGTCAT TGATACCCAT
ACTGCTGTAG GTGTTGATGT GTATGACAAA TATGTAATTT CCACCGGTGA CGTGACAAAG
ACGGTCATTG CGTCAACGGC AAGTCCTTTC AAATTTAATG AAAGTGTGGT AAAAGCAGTT
TTGGGAAATG AAGCGTTAAA AGGAAGGACG GAATTTGAAC TTCTTGAGGT TTTGGCAAAA
GAGTGCAGGC TTAAAATACC GGAAGGTTTG AAAGATCTTG ACAAAAAGCC TGTGCTTCAC
AAACAGGTTT GCAGTAAATT TGATATGAAA CAGCAGGTTG AAAGTATTCT TGGTCTGTAA
 
Protein sequence
MYYESTRGGL KSVSSAEAIK RGIAPDGGLF VPENKVSFTG SEISAMADMS YQERALYILK 
HYLTDYSDEE IADCVYNAYT DEKFDDKRIA PLVQLNENVN ILELWHGPTC AFKDMALQIL
PHFLVKAVRK TGETGEIVIL VATSGDTGKA ALEGFKDVEG TRIIVFYPQD GVSQVQKMQM
VTQEGKNVYT IGVEGNFDDA QSGVKAIFTD EELKQKMDKG NFKFSSANSI NWGRLVPQIV
YYFSAYADML KNGEIKEGDK INFVVPTGNF GNILAAFYAM QMGLPVNRLI CASNDNNVLT
DFINTGVYDK NREFKRTISP SMDILISSNL ERLLFELTGH DPLPVNNWMS SLKETGKYTV
DNTMKKKISE IFWGGYSNEA ETLKTIEAIY KEYGYVIDTH TAVGVDVYDK YVISTGDVTK
TVIASTASPF KFNESVVKAV LGNEALKGRT EFELLEVLAK ECRLKIPEGL KDLDKKPVLH
KQVCSKFDMK QQVESILGL