| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1376 |
|---|
| Symbol | |
|---|
| ID | 4809371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1679668 |
|---|
| End bp | 1680915 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640106800 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_001037801 |
|---|
| Protein GI | 125973891 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000372588 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATA TAGCAGTGAT GGGATACGGA GTGGTCGGCT CCGGAGTTGT TGAAGTTATA
AGAAAAAACA GTGTCAGCAT ATCAAAGAAA GCGGGTCAGG AGATTCGCGT AAAAAAAATA
CTGGATATCA GGGATTTTCC GGACAGTCCT GAACGGGATT TGTTTACAAA GAATCCTGAT
GAAATTTTTG ATGACCCGTC AATAGGAATA GTTGTTGAGA CCATAGGCGG AATAGGTGCT
GCGTACGAAT TTACAAAGAA GGCTTTGAGC AAAGGAAAGA ATGTTGTAAC CTCGAACAAG
GAGCTGGTTG CAACCCATGG ACCTGAACTT TTGAAGCTTG CAAAGGAAAA TGGAGTAAAC
TATCTGTTTG AAGCAAGTGT CGGCGGTGGA ATTCCCATTA TCAGGCCTTT GAACCGCTGC
CTTGCCGCAA ATGAAATACA CAGCATCATA GGAATACTCA ACGGAACTAC GAACTACATA
TTAACACAGA TGAAAAGGCA GGGAAAAGAT TTTGACGAGG CTTTGAAAGA GGCACAGCAG
AAAGGATATG CGGAAGCGGA TCCAACCGCG GACATAGAAG GGCATGATGC ATGCAGAAAA
ATTGCAATAC TCTCATCCAT TGCGTACAAT GAATTTGTTG ATTACAAAAA GATACATACG
GAAGGCATAA AAAAAATAAG CCTTGCGGAT ATGAAATATG CCGAAAGCAT GGATTCAACC
ATCAAGCTTG TCGCCATAAG CGAAAAAATC GGTGACGGTA TTATGGCAAG GGTTGCTCCT
GCGATAGTAA GCAGCAAAAG TCCGCTTTAC AGTGTTGAAG ATGTTTTTAA TGCTATTGTT
GTGAGAGGAG ATGCAATTGG AGAAGTGATG TTTTACGGCC CGGGAGCGGG CAAGCTCCCC
ACGGCAAGCG CCGTTGTGGC GGATGTAATT GAAATTGTGA AGCATTGGGG TACCTGCGGC
AGCTATAACT GGGTTGTAAA AGACGGCGGC AACGTCATTG ATTTGAAAGA AACCAGGACA
AGGTATTTTG TGAGACTGAA AGTGGAGAAT GAAGCTGAAG CTAAAAAAGC GGTGGAGAAT
GCTTTTGGAA ATGTTGAATG GGTAAAAGCG TATGATGCAA GTGTACAGGA TGAATTGGCA
TTTGTTACTT CCTGCGTTTT GGAGAAAGAC TATTGCAATT CTCTTCAACA ACTTAAAGGC
AGCAAAGCTG TAAAAGATGT GGTAAATGCC ATAAGAGTCC TGGACTAA
|
|---|
| Protein sequence | MVNIAVMGYG VVGSGVVEVI RKNSVSISKK AGQEIRVKKI LDIRDFPDSP ERDLFTKNPD
EIFDDPSIGI VVETIGGIGA AYEFTKKALS KGKNVVTSNK ELVATHGPEL LKLAKENGVN
YLFEASVGGG IPIIRPLNRC LAANEIHSII GILNGTTNYI LTQMKRQGKD FDEALKEAQQ
KGYAEADPTA DIEGHDACRK IAILSSIAYN EFVDYKKIHT EGIKKISLAD MKYAESMDST
IKLVAISEKI GDGIMARVAP AIVSSKSPLY SVEDVFNAIV VRGDAIGEVM FYGPGAGKLP
TASAVVADVI EIVKHWGTCG SYNWVVKDGG NVIDLKETRT RYFVRLKVEN EAEAKKAVEN
AFGNVEWVKA YDASVQDELA FVTSCVLEKD YCNSLQQLKG SKAVKDVVNA IRVLD
|
|---|
| |