| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1374 |
|---|
| Symbol | |
|---|
| ID | 4809369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1677115 |
|---|
| End bp | 1677903 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640106798 |
|---|
| Product | copper amine oxidase-like protein |
|---|
| Protein accession | YP_001037799 |
|---|
| Protein GI | 125973889 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000174509 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGACAG TATTTGCTTT AACTATACTT TTTTCAAATA TCACTTTTGC GATTAATATA
CCGCTGCGTG TGCTTGTAAA TGGAGAAGAG CTGTATTTTC CGGACGAAAA GCCGTTCATC
GATGCAAATG GAAGGACGCA GACACCGGCA AGGTTTATTG GAGAAGCTTT GGGAGCTACA
GTAACTTGGG ATGCAAATGC TAAGAAAGCA GTATTTAAAA TGGATGGAAC GACATTGGAG
TTGTTTATTG GGGAGAGAGA ATATCAGTTA AACGGTCAAA AGAAGCAAAT GGATACGGAA
GCATTATTGA TAAATGGAAG GACATTTGTA CCGGCCCGCT ATGTGGCGGA GGCATTTGGT
GCAACTGTCA GGTGGAAGGA TGAGATTAAA ACTGTGTACA TAGATGCAAA CAAGACAGAT
AAAGTTGAAG ATGAGGACGA TACAAGGGAA GTAGCCGGGT TTATTGTACC AAAGGATACG
GATTTAATGG TTGCCGCTTC AAAAGATGAT ACTAGCTATG AGGTGGTGTT CACAATAGGT
TTTTTAAAAA AGGATGTTGA AAAGCAGAAA GATGATATGG AGAAAATATT GTTACAAAAA
TTTAGTGAAG AGACAGTAAA AGAAATAATG AGTGTTGTAA GGTCAAAAGT AAAAGATACG
GATGTTATTG AGGCAAGATA CTTTTATGAC AAAAAAGCAG ATCAGTATAT GTACATGCCT
AAGTCATGGC CGATCAGAGG TTCAACAATT ACCCTATATA TATACAGAAA AGGAGACAAA
CCTTTTTAA
|
|---|
| Protein sequence | MLTVFALTIL FSNITFAINI PLRVLVNGEE LYFPDEKPFI DANGRTQTPA RFIGEALGAT
VTWDANAKKA VFKMDGTTLE LFIGEREYQL NGQKKQMDTE ALLINGRTFV PARYVAEAFG
ATVRWKDEIK TVYIDANKTD KVEDEDDTRE VAGFIVPKDT DLMVAASKDD TSYEVVFTIG
FLKKDVEKQK DDMEKILLQK FSEETVKEIM SVVRSKVKDT DVIEARYFYD KKADQYMYMP
KSWPIRGSTI TLYIYRKGDK PF
|
|---|
| |