Gene Cthe_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1355 
Symbol 
ID4809350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1648821 
End bp1649753 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content31% 
IMG OID640106779 
Productglycosyl transferase family protein 
Protein accessionYP_001037780 
Protein GI125973870 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTAG TTTCTGTTAT TATTCCTACC TATAATGGCA GTCAATACAT TTCGAGAGCT 
TTAAACAGTG TACTGAATCA GACGTACAAA AACATTGAGA TAATAATTGT AGATGATAAT
GGTAGGAACA CAGAAGAGCA ATTGAAAACG CAGAAAATCA TTGAGCCGTT TCTTAATGAT
AAGAGAGTTA AGTATGTTAT ACATGAAGAG AATAAAAATG GCGCAGCTGC TCGAAATACT
GGGTTTAGAA ATTCAAATGG GAAATATATT GCGTTCCTGG ATGATGATGA TGAATATTTA
CCTAATAAAA TTGCTGATCA GGTTGAAGTG ATTTCAAAGT TAGATGAAGA TTGGGGTATG
GTGTATTGTG CTTCAAATTA TAGAGGATTT GAAAAAAGCG GAGATTTGTT ATATGATTTA
TTGTTACACT CTGTGGTAAT TGGTTCAAAT TCTTTAATGA TTAAGCGTGA AATATTTGAA
AAGCTAAACG GATTTGACGA GTCTTTTTTG AGACATCAAG ATTATGAGTT TACTGCTCGT
GCTGCAGCCA TTACCAATAT AAAATGTGTA AAATCAGTTG GTTACATTTA TAATTCTGAA
GTAGGCAGAA ATAAAGCAAA ATCAGTAGAA ATTGCTCAAA AATACAGAGC TCACTATATT
GATAAAATGT TACCGCTAAT TAAAAAATTC TCGAAGTTTA GACAAAAAGT AATAATTTGC
AGTAATTCAA TGGAAGTAGT TTCAGTCTAT TTGCGCAAAT TGAAGCTGTG GATGTTCTAC
AAAGAGCTAA GAAAATTTAC ATCTCAATGG GACATAAATA TTGGGATACA TATCATTTTA
TATACTTTAT TAATGAAAAC ATTACGAAAA TTAAATCGAA AGCCTTATAA AAATGCTAAA
GAATGGGGTA AAAAATGTTA CAGCAATCAT TAA
 
Protein sequence
MDLVSVIIPT YNGSQYISRA LNSVLNQTYK NIEIIIVDDN GRNTEEQLKT QKIIEPFLND 
KRVKYVIHEE NKNGAAARNT GFRNSNGKYI AFLDDDDEYL PNKIADQVEV ISKLDEDWGM
VYCASNYRGF EKSGDLLYDL LLHSVVIGSN SLMIKREIFE KLNGFDESFL RHQDYEFTAR
AAAITNIKCV KSVGYIYNSE VGRNKAKSVE IAQKYRAHYI DKMLPLIKKF SKFRQKVIIC
SNSMEVVSVY LRKLKLWMFY KELRKFTSQW DINIGIHIIL YTLLMKTLRK LNRKPYKNAK
EWGKKCYSNH