Gene Cthe_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1348 
SymbolrpsU 
ID4809488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1641267 
End bp1641443 
Gene Length177 bp 
Protein Length58 aa 
Translation table11 
GC content37% 
IMG OID640106772 
Product30S ribosomal protein S21 
Protein accessionYP_001037773 
Protein GI125973863 
COG category 
COG ID 
TIGRFAM ID[TIGR00030] ribosomal protein S21 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000370973 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTGAAG TTAGAGTGAA AGAGAATGAG TCTCTTGATA GTGCTCTGAA AAGATTTAAA 
AGACAGTGCG CTAAAGCAGG TGTATTGGCA GAAGTAAGAA AAAGAGAGCA CTATGAGAGC
CCAAGTGTTA GAAGAAAAAA GAAATCTGAA GCAGCAAGAA AAAGAAGGTA CAAATAA
 
Protein sequence
MSEVRVKENE SLDSALKRFK RQCAKAGVLA EVRKREHYES PSVRRKKKSE AARKRRYK