| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1344 |
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| Symbol | |
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| ID | 4809484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1635311 |
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| End bp | 1637485 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640106768 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001037769 |
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| Protein GI | 125973859 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000566061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGATG GTTATAGCAG ACTTATCAAA AAAATTAAAA AATACAACCC AAACTGCGAT
TTCGCACTCA TTGAAAAGGC TCACAATCTT TCACTGGAGG CGCATAAAGG TCAGCAGAGG
GAATCCGGCG ATCCTTTTAT TGTCCATCCC ATGGAAGTTG CCAACATACT GGCAGATCTC
GAGCTGGATT GCACTGCAAT AGTTGCGGGT ATTCTTCATG ATATTGTCGA AGATACATCT
TACACTATTG AACAGATTAG GGAAAATTTC GGTGATGAAG TCGCAAATCT CGTGGACGGG
GTAACCAAGT TGGGCAAGAT TCCCTACACT ACCAAGGAGG AATTGCAGGC TGAAAACCTC
CGAAAAATGT TTCTTGCCAT GGCAAAGGAC ATCAGGGTTA TTCTCATAAA GCTGGCCGAC
CGTTTGCACA ACATGCGCAC TCTTAAGTAT ATGCCCCCGG AAAAACAAAT TGAGAAGGCA
AAAGAAACTC TTGAAATATA CGCCCCTTTG GCTCACAGGC TTGGTATATC GAAAATAAAA
TGGGAGCTTG AGGACCTTTG TCTAAGATAT CTTGATCCTA AAGGCTATTA CGACCTTGTG
AACAAAATAG CCAAAAAGAG AAGAGAAAGA GAAGCATATA TTTCCGAGAT TATAAAAACC
ATTCAGGAGA AAACCGTTGA GATAGGCATT GATGCCCATA TTGAGGGAAG ACCAAAGCAT
TTTTACAGTA TTTACAGAAA AATGGTGCAG CAAAATAAAA CTATAGAGCA GATATATGAC
CTTTTTGCGG TAAGAGTCAT TGTCACAACG GTAAAAGACT GCTATGCTGT TTTGGGCCTT
GTGCATGAAA TTTTCAAGCC CATGCCGGGA AGATTCAAAG ACTATATAGC AATGCCCAAA
CCCAATATGT ATCAATCTCT TCATACCACG TTGATTGGAC ATGAGGGAGT TCCTTTTGAA
GTGCAAATAA GGACATGGGA GATGCACAGA GTGGCCGAGG TAGGTATAGC AGCACACTGG
AAATATAAAG AAGGCAAGTC CGCGGATGAT TATGACAACA AACTGGCTTG GCTGAGGCAG
CTTCTGGAAT GGCAGAAGGA AATGCGGGAT GCCAGTGAGT TTATGGAAAC ATTGAAAATA
GACCTTTTTA CCGATGAGGT TTTTGTTTTT ACACCCAAGG GTGATGTCAT AAGTCTTCCC
GCCGGTTCAA CGCCTATAGA TTTTGCCTAT GCAATCCACA GTGCTATCGG AAACAAGATG
TCCGGAGCAA AAGTAAACAA TAAGATTGTA CCTATTGACT ATGTGCTCCA GAACGGAGAC
ATAGTGGAGA TACTTACATC TTCAAACGTA CAGGGGCCAA GCCGGGATTG GCTTAAAATT
GTAAAGAGTT CCCAGGCAAA GAATAAAATA AACCAGTGGT TTAAGAAAGA AAAAAGAGAA
GAAAATATTA TAAGAGGAAA GGAAATGATT GAAAAGGAGC TGAAAAAGCA GGGGTTTACC
GCAAGTCAGC TCTTTAAACC TGAGTGGGTG GATATAATAC TCAAAAAATA CACTTTTGCC
ACCATTGAAG ACCTCTGGGC GGCCATAGGT TATGGCGCAC TTACTGCAAA CAGGGTTATT
TCCAGGCTCA AAGAGGAATA CAGGAAAACT GTCAAGGCCG AAGAACTTGC GGAACAGATG
GCCAAACTGG ATGACAAAAA GGTAAGAATT CGTGCCAAAA AAGTACCGGA GAACGGTGTA
ATCGTTAAAG GAATAGAGAA TTGCCTGGTA AGGATTTCCA GATGCTGCAA TCCTGTTCCG
GGTGATGAGA TTATCGGTTA TATTACAAGA GGCAGGGGTG TTTCGGTACA TCGAAAGGAC
TGTATTAATA TCATGAATAA TATTGACGGC GACAACAGGC TTATCGAGGT AGCTTGGTAC
ACAGCAAACA ATGTGGCATA CAAGGCTGAT ATTACTATCA TGGCTCATGA CAGGACGGCG
CTTTTGATGG AGATAACCAA CGTTATTGGA GAGGCAAAGA TTCCGCTTAA GGCGATAAAT
GCAAGAACCA CCAAAGATCA GATTGCTATT ATGAACCTTA TTTTGGAGAT TACGAATACG
GAACAGCTTG AAAGTATCAT TAAAAAAATC AGAAAAGTTG ACGGAGTGTT TGAGGTATCA
AGAAACAGAC AGTAA
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| Protein sequence | MGDGYSRLIK KIKKYNPNCD FALIEKAHNL SLEAHKGQQR ESGDPFIVHP MEVANILADL
ELDCTAIVAG ILHDIVEDTS YTIEQIRENF GDEVANLVDG VTKLGKIPYT TKEELQAENL
RKMFLAMAKD IRVILIKLAD RLHNMRTLKY MPPEKQIEKA KETLEIYAPL AHRLGISKIK
WELEDLCLRY LDPKGYYDLV NKIAKKRRER EAYISEIIKT IQEKTVEIGI DAHIEGRPKH
FYSIYRKMVQ QNKTIEQIYD LFAVRVIVTT VKDCYAVLGL VHEIFKPMPG RFKDYIAMPK
PNMYQSLHTT LIGHEGVPFE VQIRTWEMHR VAEVGIAAHW KYKEGKSADD YDNKLAWLRQ
LLEWQKEMRD ASEFMETLKI DLFTDEVFVF TPKGDVISLP AGSTPIDFAY AIHSAIGNKM
SGAKVNNKIV PIDYVLQNGD IVEILTSSNV QGPSRDWLKI VKSSQAKNKI NQWFKKEKRE
ENIIRGKEMI EKELKKQGFT ASQLFKPEWV DIILKKYTFA TIEDLWAAIG YGALTANRVI
SRLKEEYRKT VKAEELAEQM AKLDDKKVRI RAKKVPENGV IVKGIENCLV RISRCCNPVP
GDEIIGYITR GRGVSVHRKD CINIMNNIDG DNRLIEVAWY TANNVAYKAD ITIMAHDRTA
LLMEITNVIG EAKIPLKAIN ARTTKDQIAI MNLILEITNT EQLESIIKKI RKVDGVFEVS
RNRQ
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