Gene Cthe_1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1342 
Symbol 
ID4809482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand- 
Start bp1634126 
End bp1634731 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content45% 
IMG OID640106766 
Productbeta-lactamase-like protein 
Protein accessionYP_001037767 
Protein GI125973857 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.224258 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAATAA AATGTCTGCC TATAGGACTT TTTGCTTCCA ACTGCTATAT TGTGGGTCAG 
AACGGAGAAG GCGTGGTTAT TGACCCCGGA TGTTCACCTC AAATGATAGT GGATGCCGCA 
AAGGAAAACA ATCTGGAAAT TAAATATATA ATAATAACTC ACGGACACAT TGACCATCTG 
ATGTCGGTGG ATGAAGTCAG AAAAAAGACA GGGGCGGAGG TTCTCATTCA TGAAAAAGAT 
GCGGACAAAT TGACCGACCC CAATTTAAAT GATCCTGTTG GAGTGGGATT GGGCAGGAAG 
TGCAAAGCGG CTGACAGACT TTTAAAAGAC GGTGAAGTAA TAACGGTCGG AGGACTTGAT 
TTTGAGATAA TTCACACTCC GGGCCATTCC GCAGGAGGCA TTTGCATAAA AGTCGGCGAT 
GTGGTTTTTA CCGGAGACAC CTTGTTTTGC ATGGGCATAG GCCGCACCGA CTTTCCGGAT 
GGAGATTTGA GTACTCTTTT GGATTCCATT AAAAACAAGC TTATGAAGCT TGACGACAAT 
GTTGTGGTTT ATCCCGGACA TGGAGAGCCA ACTACCATTG GACGTGAGCG GAAGGAGTTC 
TCATGA
 
Protein sequence
MVIKCLPIGL FASNCYIVGQ NGEGVVIDPG CSPQMIVDAA KENNLEIKYI IITHGHIDHL 
MSVDEVRKKT GAEVLIHEKD ADKLTDPNLN DPVGVGLGRK CKAADRLLKD GEVITVGGLD 
FEIIHTPGHS AGGICIKVGD VVFTGDTLFC MGIGRTDFPD GDLSTLLDSI KNKLMKLDDN 
VVVYPGHGEP TTIGRERKEF S