| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1332 |
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| Symbol | |
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| ID | 4809472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1621165 |
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| End bp | 1622418 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640106756 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001037757 |
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| Protein GI | 125973847 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000373388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACAC AGGCACCTAA AGGAACAAAG GACATTTTGC CGTCCGAGGT TTACAAATGG
CACTACATAG AAAAGGAAAT AGCAAAGCTT TGTCATGACT TTGGCTATAA GGAAATCCGC
ATTCCCGTAT TTGAACATAC TGAACTTTTC CAACGGGGAG TCGGGGATAC TACGGATATT
GTACAAAAGG AAATGTACAC TTTTCTGGAT AAAGGGCAGA GAAGCATTAC ATTGAGGCCT
GAGGGAACTG CGGGAGTTGT AAGGAGCTAT ATTGAAAACG GCATGGCATC GCTTCCCCAG
CCTGTAAAAC TGTATTACAA CATTACGGCT TACAGGTATG AAAATGTGCA AAAAGGCCGC
TACAGGGAGT TTCACCAGTT TGGGGTCGAG GCTTTTGGAG CCCCGGGTCC TTCAATCGAT
GTTGAAATAA TAAGCATGGT GAAGTTGTTT TTTGACCGCC TGGGAATAAA AGAAATCAGC
CTCAATATAA ACAGCATAGG TTGTCCCGTC TGCAGGGCTG AATACAATAA GAAGCTGATG
GATTATTTAA GGCCGAACCT AAGTAAATTG TGCGCTACAT GCAATACACG TTTTGAAAGG
AATCCTCTGA GAATTATCGA CTGCAAGGAG GAATCCTGTA AAAAAATTAC GGCTAATGCG
CCGGCTCTTG TGGAGAATTT GTGCGATGAC TGCAAGAACC ATTTTGAAGG ACTTAAAGCC
GGGCTTGAAA ACTTGGGCAT TGATTACAAG ATTGATAAAA ACATAGTAAG AGGCCTTGAT
TATTATACCA AAACCGTATT TGAATTTGTG TCGGACAATA TCGGCGCACA GGGTACGGTA
TGTGGCGGAG GAAGATATGA CGGATTGGTT GAGGCATGCG GCGGAAAGCC CACACCGGGA
ATAGGTTTTG CAATGGGACT GGAAAGGTTA TTAATGGTGA TGGAAAATCA AGGTATTAAA
TTCCCCGAGT CTAAAAAACC GGATATTTTT ATTGCGGCGA TAGGCGACAA AGCCAACAGT
TACGCGGAAA AGATGGTTTA TGAATTGCGG AAGGAAGGTC TTAGCGCAGA GAAAGATTTG
ATGGGCAAAA GCCTTAAGGC GCAGATGAAA TATGCCGACA AGCTGGGAGC AAAGTACAGC
ATTGCCCTCG GCGATGATGA GATTGAGTCG GGCAAGGCGG TACTTAAGAA TATGGAGACG
GGAGAACAAA AAGAAATAAG TCTTGACACC TTAATAAGCA GGTTGAAGAT GTAA
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| Protein sequence | MLTQAPKGTK DILPSEVYKW HYIEKEIAKL CHDFGYKEIR IPVFEHTELF QRGVGDTTDI
VQKEMYTFLD KGQRSITLRP EGTAGVVRSY IENGMASLPQ PVKLYYNITA YRYENVQKGR
YREFHQFGVE AFGAPGPSID VEIISMVKLF FDRLGIKEIS LNINSIGCPV CRAEYNKKLM
DYLRPNLSKL CATCNTRFER NPLRIIDCKE ESCKKITANA PALVENLCDD CKNHFEGLKA
GLENLGIDYK IDKNIVRGLD YYTKTVFEFV SDNIGAQGTV CGGGRYDGLV EACGGKPTPG
IGFAMGLERL LMVMENQGIK FPESKKPDIF IAAIGDKANS YAEKMVYELR KEGLSAEKDL
MGKSLKAQMK YADKLGAKYS IALGDDEIES GKAVLKNMET GEQKEISLDT LISRLKM
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