| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1328 |
|---|
| Symbol | |
|---|
| ID | 4809468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium thermocellum ATCC 27405 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009012 |
|---|
| Strand | - |
|---|
| Start bp | 1611804 |
|---|
| End bp | 1613081 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640106752 |
|---|
| Product | stage II sporulation P |
|---|
| Protein accession | YP_001037753 |
|---|
| Protein GI | 125973843 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02867] stage II sporulation protein P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.944507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTAT ACGGTTTGAG AAAAAGAAAG TTTGATTATG GCAAGTTGTT TAAGATTGCC
CTGATAATAA TACTTTCAAT CGGGGCAATA AAGATTGGGG CAATTGCCGG AGACGTGCTC
TACAAGTCTG ATAAAAAGAT TATTGGAAAG ATTGAAGTTG AAACTTTAAG AGCCACTCTC
AATGCTTCAC TTCCTATAAT TGACACCATT TACAACAGCG GCAATATCAG TTTTTCGATT
TCGGGACAGA TAAAAGAAAT TATTAATCTG GTTTTCTATT TTGATCTCAG TAATCCTGTT
ACAATTTTTG GGGCAGAGTC TCCAATATTC TATAGTTACT ATATGAATGA GTACCAAAAA
CAGCTGGCCC AAAATCAAAA CTGTGAACCT TACTTCTATA TGGCGGATTT GGATACGCCG
GATGACAATA GCGACAAGGT CAAAAATCCT GACAATAATG CTCCTGAACC CACATATCCG
GCCAGCAGCA TAAGTTATGA GGTAAATGAG TTGGACAGAA CCGGAACTCC TGAGAATGCT
ACCACTGTTA CGGCGGACAA AATTGCAATC AACAGTCATG AAGTTGACTA TGAAATTGAT
GTTGAAAAGC TTCTTAACGA ACCTTTAAAC ATCAGCTTTG ACAAAAAGGG TCCCAAAGTT
CTTATATACC ATACACATAC CACGGAAGGA TTTATTAAAG ACCTAAGCGA GCTGGATAAA
AGTGGTATTC CAAGCAGAAC CACCGATAAC AGATACAATG TAGTAAGAGT TGGGGAGGAA
CTGGCTCAGA CATTAAGGAA AAAATACGGT ATTGAAGTGA TTCATAACGC CACTGTTCAC
AATCATCCCT CGGACACAGG AGCTTATGGT AGATCCCTTA ATACTGCGGC CAACATTTTA
AAAAGTTATC CTTCAATAAA AATAGTCCTG GATATTCACA GGGACGGGCT GGGCGAAGGT
AAACTTAGAG TGGCGACCAA GATTAATAAC AAGGATGCGG CAAAAATAAT GTTTGTGGTG
GGAACCGACG GGACAGGGCT TGAGCATCCT AACTGGCGGG AGAATTTGAA ATTGGCAATC
AAGCTTCAGC AAAAGCTTAA TGAAAAGTAT CCCGGTATCA CAAGACCGAT TTATATAAGC
CGCAACCGCT ACAACCAGCA CCTTACCAAC GGTTCTTTGA TTGTTGAAAT CGGAGGGGAT
GGCAATACAA TAAATGAATG TTTGGAGAGT ACGAAATATC TTGCCGAGGT TTTAAACGAT
GTCATTAATA ATAAATAA
|
|---|
| Protein sequence | MRVYGLRKRK FDYGKLFKIA LIIILSIGAI KIGAIAGDVL YKSDKKIIGK IEVETLRATL
NASLPIIDTI YNSGNISFSI SGQIKEIINL VFYFDLSNPV TIFGAESPIF YSYYMNEYQK
QLAQNQNCEP YFYMADLDTP DDNSDKVKNP DNNAPEPTYP ASSISYEVNE LDRTGTPENA
TTVTADKIAI NSHEVDYEID VEKLLNEPLN ISFDKKGPKV LIYHTHTTEG FIKDLSELDK
SGIPSRTTDN RYNVVRVGEE LAQTLRKKYG IEVIHNATVH NHPSDTGAYG RSLNTAANIL
KSYPSIKIVL DIHRDGLGEG KLRVATKINN KDAAKIMFVV GTDGTGLEHP NWRENLKLAI
KLQQKLNEKY PGITRPIYIS RNRYNQHLTN GSLIVEIGGD GNTINECLES TKYLAEVLND
VINNK
|
|---|
| |