Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1324 |
Symbol | |
ID | 4809464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1607013 |
End bp | 1608068 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640106748 |
Product | heat-inducible transcription repressor HrcA |
Protein accession | YP_001037749 |
Protein GI | 125973839 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCTTGG ACGAGAGAAA AAAGAGAATT CTGCAATCCA TAATTGACGA CTATATAAGC ACTGCAGAGC CTGTAGGTTC AAGAACTGTT GCAAGGAAGC ATGAGCTTGG CTTGAGTTCG GCCACTATCA GAAATGAAAT GGCTGACTTG GAAGAGATGG GCTATCTTAC ACAACCTCAT ACTTCTGCGG GACGTATTCC TTCTGATAAA GGCTACAGAT TTTATGTGGA TCAGCTGATG AAGCAAAGTG AATTAACCAT GGAAGAAATT TACAGCATTA AATCTGCCAT GGATACAAAA ATTAATGAGC TAAGCCAGCT TTTGAAGCAG GTATCGGTAG CTATGTCGAA AATTACAAAA TATGCTTCCA TGGCTGCCTT ACCTGAGAAG AAAAACAGTG TTTTGAAGGC TGTGCAGGTT GTTCCGGTGG AAAAAGGAAA AGCTCTTGTA GTTGTCATTA CCAATTCGGG AACTATAAAA AACAGTCTTA TAAATATATC TGAGACGGTT TTGCCCGAAC ATTTGGTTTA TGTTTCAAAT ATTTTTAATG AGAAACTGTC CGGGCTTACA ATAGGTCAGA TAAATATGCC GGTAATCAGA GAAATAGAGC TTCTTATGGG GCCTTCCCAG GATATATTGA TGCCGGTGCT TAACGGTGTA ACTGATTGCA TAGAACAGAT AGACAAGTCG GAAGTGTTTT TGGAAGGCGC AATCAATATG CTGAATTATC CTGAATTCAG CAATGTGGAG AGGGCTAGAG AATTCCTTAA ACTTATGGTT GAAAAGGATT TAATCAGCAG AGTGTTAAAA GACGCCAATT CTGAGAAAGA CAAAATCGTT ATAAAGATAG GCCATGAAAA TGATATTGAG GAAATGAAAG AATGCAGCCT TATTACGACC ACATACACTG CAGGCGATGT TGTAATAGGC ACAATAGGAA TCATTGGCCC TACAAGGATG GAGTATTCGA AGGTTCTGGC AGCTATAAAC TATATGAAGT CCAAGATGAA AGAACATGTT GAAAGACTGA TAGGAAAGGA TCTTTCCGGG AAATAA
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Protein sequence | MFLDERKKRI LQSIIDDYIS TAEPVGSRTV ARKHELGLSS ATIRNEMADL EEMGYLTQPH TSAGRIPSDK GYRFYVDQLM KQSELTMEEI YSIKSAMDTK INELSQLLKQ VSVAMSKITK YASMAALPEK KNSVLKAVQV VPVEKGKALV VVITNSGTIK NSLINISETV LPEHLVYVSN IFNEKLSGLT IGQINMPVIR EIELLMGPSQ DILMPVLNGV TDCIEQIDKS EVFLEGAINM LNYPEFSNVE RAREFLKLMV EKDLISRVLK DANSEKDKIV IKIGHENDIE EMKECSLITT TYTAGDVVIG TIGIIGPTRM EYSKVLAAIN YMKSKMKEHV ERLIGKDLSG K
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