Gene Cthe_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_1324 
Symbol 
ID4809464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp1607013 
End bp1608068 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content39% 
IMG OID640106748 
Productheat-inducible transcription repressor HrcA 
Protein accessionYP_001037749 
Protein GI125973839 
COG category[K] Transcription 
COG ID[COG1420] Transcriptional regulator of heat shock gene 
TIGRFAM ID[TIGR00331] heat shock gene repressor HrcA 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTGG ACGAGAGAAA AAAGAGAATT CTGCAATCCA TAATTGACGA CTATATAAGC 
ACTGCAGAGC CTGTAGGTTC AAGAACTGTT GCAAGGAAGC ATGAGCTTGG CTTGAGTTCG
GCCACTATCA GAAATGAAAT GGCTGACTTG GAAGAGATGG GCTATCTTAC ACAACCTCAT
ACTTCTGCGG GACGTATTCC TTCTGATAAA GGCTACAGAT TTTATGTGGA TCAGCTGATG
AAGCAAAGTG AATTAACCAT GGAAGAAATT TACAGCATTA AATCTGCCAT GGATACAAAA
ATTAATGAGC TAAGCCAGCT TTTGAAGCAG GTATCGGTAG CTATGTCGAA AATTACAAAA
TATGCTTCCA TGGCTGCCTT ACCTGAGAAG AAAAACAGTG TTTTGAAGGC TGTGCAGGTT
GTTCCGGTGG AAAAAGGAAA AGCTCTTGTA GTTGTCATTA CCAATTCGGG AACTATAAAA
AACAGTCTTA TAAATATATC TGAGACGGTT TTGCCCGAAC ATTTGGTTTA TGTTTCAAAT
ATTTTTAATG AGAAACTGTC CGGGCTTACA ATAGGTCAGA TAAATATGCC GGTAATCAGA
GAAATAGAGC TTCTTATGGG GCCTTCCCAG GATATATTGA TGCCGGTGCT TAACGGTGTA
ACTGATTGCA TAGAACAGAT AGACAAGTCG GAAGTGTTTT TGGAAGGCGC AATCAATATG
CTGAATTATC CTGAATTCAG CAATGTGGAG AGGGCTAGAG AATTCCTTAA ACTTATGGTT
GAAAAGGATT TAATCAGCAG AGTGTTAAAA GACGCCAATT CTGAGAAAGA CAAAATCGTT
ATAAAGATAG GCCATGAAAA TGATATTGAG GAAATGAAAG AATGCAGCCT TATTACGACC
ACATACACTG CAGGCGATGT TGTAATAGGC ACAATAGGAA TCATTGGCCC TACAAGGATG
GAGTATTCGA AGGTTCTGGC AGCTATAAAC TATATGAAGT CCAAGATGAA AGAACATGTT
GAAAGACTGA TAGGAAAGGA TCTTTCCGGG AAATAA
 
Protein sequence
MFLDERKKRI LQSIIDDYIS TAEPVGSRTV ARKHELGLSS ATIRNEMADL EEMGYLTQPH 
TSAGRIPSDK GYRFYVDQLM KQSELTMEEI YSIKSAMDTK INELSQLLKQ VSVAMSKITK
YASMAALPEK KNSVLKAVQV VPVEKGKALV VVITNSGTIK NSLINISETV LPEHLVYVSN
IFNEKLSGLT IGQINMPVIR EIELLMGPSQ DILMPVLNGV TDCIEQIDKS EVFLEGAINM
LNYPEFSNVE RAREFLKLMV EKDLISRVLK DANSEKDKIV IKIGHENDIE EMKECSLITT
TYTAGDVVIG TIGIIGPTRM EYSKVLAAIN YMKSKMKEHV ERLIGKDLSG K