Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_1312 |
Symbol | |
ID | 4809452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | - |
Start bp | 1595498 |
End bp | 1596886 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640106736 |
Product | glycyl-tRNA synthetase |
Protein accession | YP_001037737 |
Protein GI | 125973827 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0423] Glycyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00389] glycyl-tRNA synthetase, dimeric type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00852036 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAGTAA AAAAGACAAT GGAGAAGATT GTAGCCCTGG CTAAAAACCG AGGATTTATT TATCCCGGCT CTGAAATATA CGGCGGTTTG GCAAATTCAT GGGATTACGG ACCTCTTGGA GTGGAGCTTA AAAACAATAT AAAAAAGGCA TGGTGGAAGA AATTTGTTCA GGAAAACCCT TACAATGTGG GTGTTGACTG TGCAATACTC ATGAATCCTC AGGTGTGGGT TGCATCGGGA CATGTAGGCG GTTTCAGCGA CCCCCTGATT GACTGTAAAG AATGTAAAAC ACGTCACAGG GCGGACAAAA TGATAGAGGA ATGGAATCTT AAAAACAATG AAAATGTCAA GGTTGACGGC TGGTCCAATG AAATGCTTAT GAATTATATC AGGGAAAAGG GTGTAACCTG TCCTGAGTGT GGCGGAAAAA ACTTTACCGA TATCAGGAAG TTTAACCTTA TGTTTAAAAC TTTCCAGGGA GTGACTGAGG ATTCCAAATC CGAGATATAT TTAAGGCCGG AAACAGCCCA GGGTATATTT GTGAACTTTA AAAATGTTCA GAGAACAACA AGAAAAAAGA TACCCTTTGG TATTGGACAG ATAGGAAAGT CTTTCAGAAA CGAAATAACT CCCGGAAACT TTATTTTCAG AACCCGTGAG TTTGAACAAA TGGAGCTGGA GTTTTTCTGT GAGCCGGGAA CAGACCTTGA GTGGTTTGAA TACTGGAAGA ATTTCTGCTT CAACTGGTTA TTGAGCCTAA ACATTAAAAA GGAAAACCTG AGGATGCGTG ACCATTCAAA GGAGGAACTG TCCCACTACA GCAATGCCAC AACCGATATT GAATACCTGT TCCCGTTTGG CTGGGGAGAG CTGTGGGGAA TTGCAGACAG AACCGACTTT GACTTAAGAC AGCATGCAGA GCATTCGAAA GAGGATTTGT CCTACTTTGA CCCGAACACC AATAGAAAAT ACATACCGTA CTGTATTGAA CCGTCTCTCG GTGCAGACAG AGTTGCTTTG GTTTTCCTCT GCGATGCGTA TGACGAGGAA GAAGTGGAAG AAGGGGATAT AAGGGTTGTG CTGCGCTTCC ATCCTGCCAT AGCGCCGGTA AAAATAGCTG TGCTTCCTCT TTCTAAAAAG CTTGGAGATG AGGCATATAA GATTTATGAA ATGCTCATTA AAAAATACAA CTGTGAATAT GATGAGACAG GAAGTATAGG AAAGAGATAC AGAAGACAGG ATGAGATAGG CACACCTTAT TGCGTAACCT TTGACTTTGA TTCCCTGAAC GACAGGTGTG TTACCGTAAG AGACAGAGAC TCCATGCAGC AGGTTAGGAT TAAAATTGAC GAACTACTTT CGTATTTTGA AGGGAAATTT GATTTCTAA
|
Protein sequence | MEVKKTMEKI VALAKNRGFI YPGSEIYGGL ANSWDYGPLG VELKNNIKKA WWKKFVQENP YNVGVDCAIL MNPQVWVASG HVGGFSDPLI DCKECKTRHR ADKMIEEWNL KNNENVKVDG WSNEMLMNYI REKGVTCPEC GGKNFTDIRK FNLMFKTFQG VTEDSKSEIY LRPETAQGIF VNFKNVQRTT RKKIPFGIGQ IGKSFRNEIT PGNFIFRTRE FEQMELEFFC EPGTDLEWFE YWKNFCFNWL LSLNIKKENL RMRDHSKEEL SHYSNATTDI EYLFPFGWGE LWGIADRTDF DLRQHAEHSK EDLSYFDPNT NRKYIPYCIE PSLGADRVAL VFLCDAYDEE EVEEGDIRVV LRFHPAIAPV KIAVLPLSKK LGDEAYKIYE MLIKKYNCEY DETGSIGKRY RRQDEIGTPY CVTFDFDSLN DRCVTVRDRD SMQQVRIKID ELLSYFEGKF DF
|
| |