| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cthe_1294 |
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| Symbol | |
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| ID | 4809546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium thermocellum ATCC 27405 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009012 |
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| Strand | - |
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| Start bp | 1571358 |
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| End bp | 1572785 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640106717 |
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| Product | recombinase |
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| Protein accession | YP_001037719 |
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| Protein GI | 125973809 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAA ACGGACTGGG TGAAATTAAA AGCATTTATA TTGACGATAA TGTTTCCGGA
TCCGGCTTTG AGAGAAGGGG TATCTACGAG CTTAAACGTG ATGTGATGGA AGGAAAAATA
AATCTTCTGG TTCTGAAAGA TTTGTCCAGG CTTGGGAGAA ACAATGCAAA AACTCTTTTA
TTTCTTGATT TTTTAGAGGA GAACGGAGTA AGGGTCGTTA CCTTCGACGG AAGGTATGAC
AGCCTGAAAG ACAACGATAT TGTAGGTATC GAGACGTGGT TCAACGAGCG CTACATCCTG
GATATTTCAA GAAAAATCCG GGCCAATTTA AGATTCAAGA TACAAAAAGG GGAATATATA
GGGCATGCTC CCTTTGGATA TGAAAAGTCG CCTTATGAGA AGAACCGGCT GATTGTAAAC
GAGGAAGAGG CGGGTATTGT AAGAAGAATA TACAGCCTTT ACAAGGAAGG ATATGGATAC
AGCTATATCG CAGGCATATT GAACAGCGAA GGTGTAAAAT CGCCTTCCAA TGGCCGCTGG
AATCCCACAG CCATAAGGAG GATTCTTTTA AACAGGGTTT ATACCGGGGA TACGGTACAG
GGAGTAAGTG AGAAAATCAG TTTTAAAAGC AAGAAAACCA GACGTCTGCC AAAGGAACGA
TGGGTGATTA CTGAAAATAC CCATGAACCC ATTGTTTCCA AAGAGGAATA TGAAGAAATT
CAAAGAATAA GGAATAATAA AAATGCAAGA CCGGTTCCCC ACAAAGGGAT TATACACGTG
TTTCGCGGCA GCATATTTTG TGGGGGCTGC GGAAGCGTTA TGTTTGCAAG AAAGCGGCAT
AACAGGCCTA TGAGCTATAT TTGCAGCAGT TATGCCAAAG AAGGAAGGAC GGCGTGTACA
AGCCACAGTA TTCGAGAAAA GGATTTGTGT GAGGTTGTTT TGGATGATGT AGCAAAGCTT
TTGGATGATG AAAACATGGT AAACAAAATA CTGCAAAAGA TTGACTTGGC CGGAGCGGCG
GAGGATTATC AAACTTTGAG GGAAAAACTT TTAAAACAGA TGGAAGCAAA ACAAAAGCAG
CAGGAGATTC TTTATCAGGA TAGACTTGAA AACAAGATAT CCGAAAGTCT TTTTTTAAGG
ATGAATAACA GGCTTGAAAA CAGAATTTCT GAAATAAAAC GGGAAATTGC CCAATTGGAT
TTACGAAAGT CAGAGTTTGT GACTTCAGAA GAAAAGATTG CGAAACTGAA GAATTATATT
ACAAATAATG GAATTACCAA TGAAATAGTT AAAATTGTTA TAAACAGGAT AATAGTTTTT
GACAAAGGCG ATAATTATTT GGAAGAAAAG TGGAATCTGA ATCTTTCGCA AAAGGAAAAA
AGGTATATCG AATTATATGG TGCGGTCTTA ATTGAATACG GTTTTTAG
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| Protein sequence | MKKNGLGEIK SIYIDDNVSG SGFERRGIYE LKRDVMEGKI NLLVLKDLSR LGRNNAKTLL
FLDFLEENGV RVVTFDGRYD SLKDNDIVGI ETWFNERYIL DISRKIRANL RFKIQKGEYI
GHAPFGYEKS PYEKNRLIVN EEEAGIVRRI YSLYKEGYGY SYIAGILNSE GVKSPSNGRW
NPTAIRRILL NRVYTGDTVQ GVSEKISFKS KKTRRLPKER WVITENTHEP IVSKEEYEEI
QRIRNNKNAR PVPHKGIIHV FRGSIFCGGC GSVMFARKRH NRPMSYICSS YAKEGRTACT
SHSIREKDLC EVVLDDVAKL LDDENMVNKI LQKIDLAGAA EDYQTLREKL LKQMEAKQKQ
QEILYQDRLE NKISESLFLR MNNRLENRIS EIKREIAQLD LRKSEFVTSE EKIAKLKNYI
TNNGITNEIV KIVINRIIVF DKGDNYLEEK WNLNLSQKEK RYIELYGAVL IEYGF
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